Erythrobacter sp. 3-20A1M: F7D01_14710
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Entry
F7D01_14710 CDS
T10298
Symbol
rnr
Name
(GenBank) ribonuclease R
KO
K12573
ribonuclease R [EC:
3.1.13.1
]
Organism
eryz Erythrobacter sp. 3-20A1M
Pathway
eryz03018
RNA degradation
Brite
Enzymes [BR:
eryz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
F7D01_14710 (rnr)
Messenger RNA biogenesis [BR:
eryz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
F7D01_14710 (rnr)
Transfer RNA biogenesis [BR:
eryz03016
]
Prokaryotic type
tRNA degradation factors
F7D01_14710 (rnr)
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
QWC58151
UniProt:
A0A975R545
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Position
complement(3058852..3061212)
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AA seq
786 aa
AA seq
DB search
MTQQKNAKHSHGKPQGLPTREQILEFIQTSDTPAGKREIAKAFGLKGQEKIALKKRLKDM
AEEGLIDGKKTAYHRMGGVPKVTVLKVVEIDDGDIFAEPENWNPDDGSKPPRLLVVEDRG
GRGKGQKKTKGMPALKRGDRILARNEETDRGWRAHPMKKLPARTEGMMGVVEIDGSGKAW
LAPIDKKVRNASPIRDIGGAEEGQLVLAEPAGRGARAGVNVTEVVGDPLEPKSFSLIAIA
KHGIRHVFSEEVLEEAERAAKLPLHADKREDLRNVPIVAIDPADARDHDDAIWAEPDGNG
GFNAIVAIADVSYYVRPGGQIDREARKRGNSVYFPDRVVPMLPEVLSADVCSLKADQDRA
AMACHLHISPEGKITKWRFTRAIVRLAHNIAYEDAQAAIDDGSASDELKNLWAAWKALFA
AREARDPLDLDLPERRVVLDDKGKIAEIAVRERLDAHRVVEDFMIAANVAAAKALEAKTA
PVVYRIHEPPSREKLIALRDFLATQDKKLALGQVITPTLFNRFLKDVTDEAEKALLMEAV
LRSQTQAYYGPQNAGHFGLSLGSYAHFTSPIRRYADLLVHRALVDAYGLEQPAPPGSLPD
TSGLSERDRTKLNEITDAISQAERRAMEAERDTIDRYVAAYLAEKVGQEFDTRITGVQGF
GFFATILGFGGDGLVPVSTLGREYFHYDEAAQALIGSDTGTRYEVGQRLRLKLAESNPLT
GALKFDVPDSDGGKIEPRGDRPPARKKGGPPKGKGTGRRDGKGPPKHAQGKRGRPGNIRH
QGRKKK
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgacacaacagaaaaacgcaaagcactcgcacggcaagccccagggcctgccgacgcgc
gagcagatactcgaattcatccagacctccgataccccggccggcaagcgcgagatcgcg
aaggccttcggtctgaagggacaggagaagatcgcgctcaagaagcgcctcaaggacatg
gccgaggaaggcctgatcgacggcaagaagaccgcctatcatcgcatgggcggtgttccg
aaagtgacggtgctcaaggtcgtcgagatcgacgatggcgatatcttcgccgagcccgag
aactggaacccggacgacggctccaaaccgccgcgcctgctggtggtcgaagacaggggc
ggtcgcggcaagggccagaagaaaaccaagggtatgcccgccctcaagcgcggcgaccgc
atccttgcgcgcaacgaagaaaccgatcgcggctggcgcgcccacccgatgaagaagctg
cccgcccgaaccgaaggaatgatgggtgtggtcgagatcgacggcagcgggaaagcgtgg
cttgcaccgatcgacaagaaggtgcgcaatgcctcccccatccgcgacatcggcggggcg
gaggaaggtcagctggtcctggccgaacccgccgggcgcggagcacgcgcgggggtaaat
gtcaccgaagtggtgggcgatccgctcgagccgaaaagcttcagcctgatcgcgatcgcc
aagcacggcatccgccatgttttctccgaagaggtgctggaggaggccgagcgcgcagcc
aaactgccgctgcacgcggacaagcgcgaggacctgcgcaacgtgccgatcgtcgcgatc
gaccccgccgacgcgcgcgaccacgacgatgccatctgggcggagcccgacggcaatggc
ggcttcaacgccatcgtcgccatcgccgatgtcagctattacgtgcggcccggcggccag
atcgaccgtgaggcgaggaagcgcggcaattcggtctatttcccggaccgcgtggtaccg
atgctgcccgaagtgctgagcgccgacgtctgttcgttgaaggcggatcaggaccgtgcg
gcgatggcgtgccacctgcatatctcgccggaaggcaagataaccaagtggcgcttcacc
cgcgcgatcgtgcggctcgcgcacaatatcgcctacgaagatgcgcaggccgcgatcgac
gacggctcggcgtcggacgagctcaagaacctgtgggcggcgtggaaggcgctgttcgcg
gcccgcgaggcccgcgatccgctcgatctggacctgccggagcgccgcgtggtgctcgac
gacaagggcaagatcgccgagatcgcggtgcgcgagcggctcgatgcccaccgggtggtg
gaggatttcatgatcgcggccaatgtcgcggcggccaaggcgctggaagcgaagaccgct
cccgtggtctatcgcatccacgaaccgccgagccgcgagaagctgatcgcactgcgcgat
tttctcgccacgcaggacaagaagctggcgctgggccaggtcatcacgccgacgctgttc
aaccgcttcctgaaggacgtgacggacgaggcggagaaggcgctgttgatggaggcggtg
ctgcgcagccagacgcaggcctattacgggccgcagaacgcgggccatttcggcctgtcg
ctcggcagctacgcgcatttcacctcgccgatccgccgctatgccgacctgctggtccac
cgcgcgctggtcgatgcctacgggctggagcaaccggcgccgccgggctcgctgcccgat
accagcgggctgtcggagcgcgaccgtaccaagctgaacgagatcaccgacgcgatcagc
caggcggagcgccgcgcgatggaggcggagcgcgataccatcgaccgctacgttgccgcc
tatctcgccgagaaggtcggccaggaattcgacacgcgcatcacgggcgtgcagggcttc
gggttcttcgccaccatcctgggattcggtggggacgggctggtgccggtctccacgtta
ggtcgcgaatatttccattacgacgaggccgcgcaggcgctgatcggctcggacaccggc
acgcgctacgaggtggggcagcggctgcggctgaagctcgccgaatcgaacccgctgacc
ggcgctctcaaattcgacgtgcccgacagcgatggcggcaagatcgaaccgcgcggcgat
cgcccacccgctcgcaagaagggtggtccgcccaaaggcaaagggacgggcaggagggat
ggcaagggcccgccaaagcacgcgcagggcaagcgcggtcgccccggcaatatccggcac
caggggcgcaagaagaagtag
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