Egibacter rhizosphaerae: ER308_00130
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Entry
ER308_00130 CDS
T05860
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
erz
Egibacter rhizosphaerae
Pathway
erz00470
D-Amino acid metabolism
erz00550
Peptidoglycan biosynthesis
erz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
erz00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
ER308_00130 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
ER308_00130 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
erz01011
]
ER308_00130 (murD)
Enzymes [BR:
erz01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
ER308_00130 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
erz01011
]
Precursor biosynthesis
Amino acid ligase
ER308_00130 (murD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
AlaDh_PNT_C
NAD_binding_7
FAD_binding_3
Pyr_redox_2
ThiF
TrkA_N
NAD_binding_8
Pyr_redox
HI0933_like
Motif
Other DBs
NCBI-ProteinID:
QBI18133
UniProt:
A0A411YA90
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Position
complement(25152..26582)
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AA seq
476 aa
AA seq
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MGATTAAERDPDPRNARVLVAGLGASGLAAARALARAGASVRAIDAASSPHARRAAEELG
PLGVDVHLGVGFEDPALLGDAELVVASPGIPEHNPLLASALAEGRPVWSEPELAWRLAGG
RSRLVAVTGTNGKTTTTELLGTLLAAPTGGNIGTPLVDLLAAAEPPEVVAVELSSFQLRF
CSTLRPDVAVLLNIAPDHLDWHPDVAAYTAAKAQLWAEQGSGDVLVLGDDEGAREACAAH
PPAGRLVTSGIGPPEPGGVGIEDGLLVARVGRAGEPAEATEILPVGHLALRGPHNLANAA
AAVGAAVAAGADPGELAEPLAAYQPGAHRLTLVTERAGIAWIDDSKATNPHAAAAALASR
GEGRRIVWIGGGLAKGLDLTVLEPTVARYVKHALAIGASAAEIVSVAGTVGVPVEHTGTV
EAAVARAAAIAEPGDTVLLAPACASMDQFADYAARGDAFAAAVHTLDGRDAEVGRE
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgggtgcgaccactgccgccgagcgtgacccggacccccggaacgcgcgggtgctcgtc
gcgggcctcggtgcctcggggctggccgcggcgcgcgccctggcacgggcgggggcgtcg
gtgcgggcgatcgatgcggcctcgtcaccgcacgcgcgccgcgcggccgaggagctcggt
ccactcggcgtggacgtgcatctcggggtcgggttcgaggaccccgccctgctcggcgac
gccgagctcgtggtcgcgagccccggaatcccggaacacaacccgttgctggcctccgcc
ctggccgaggggcgcccggtgtggagcgaacccgagctcgcgtggcgcctcgccggtggt
cggtcgcggctggtggccgtgaccggcacgaacggcaagacgaccaccaccgagctgctg
ggcaccctgctcgcggccccgaccggcggcaacatcggcaccccgctcgtcgatctgctc
gcggccgccgaaccgcccgaggtggtcgccgtcgagctgtcgagcttccagctgcgcttc
tgctcgacgttgcgaccggacgtcgcggtgctgctgaacatcgcacccgaccatctcgac
tggcaccccgacgtagccgcctacaccgccgccaaggcgcagctctgggccgagcaagga
tcgggggacgtgctggtgctcggggacgacgagggtgcgcgcgaggcgtgtgccgctcac
ccgccggccggccggctggtcaccagcggtatcggtccgccggagccgggcggcgtcggg
atcgaggacggcctgctcgtcgcccgggtcggccgcgccggcgaacccgccgaggcaacg
gagatcctgccggtcgggcacctggcgctccggggaccccacaacctcgccaatgcggcc
gcggcggtcggcgcggcggtcgcggcgggggcggatcctggcgagctcgccgagccgctg
gccgcgtaccagccgggtgcccatcgcctcacgctcgtgaccgagcgcgcagggatcgcc
tggatcgacgactcgaaggccacgaacccgcacgccgcggcggccgcgcttgccagccgc
ggcgagggacggcgcatcgtgtggatcgggggagggctcgcgaaggggctcgacctcacg
gtgctcgagcccacggtcgcgcgctacgtcaagcacgccctcgcgatcggtgccagcgcg
gccgagatcgtgtccgtggccgggaccgtcggtgtgcccgtcgagcacaccggtaccgtc
gaggccgccgtcgcccgtgccgccgccatcgcggagccgggcgacacggtcctgctcgcg
cccgcctgtgcgtcgatggatcagttcgcggactacgctgcgcgcggcgatgcgttcgcc
gccgcggtccacacgctcgacggtcgtgacgccgaggtcggccgtgagtga
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