Egibacter rhizosphaerae: ER308_03170
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Entry
ER308_03170 CDS
T05860
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
erz
Egibacter rhizosphaerae
Brite
KEGG Orthology (KO) [BR:
erz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
erz03019
]
ER308_03170
03009 Ribosome biogenesis [BR:
erz03009
]
ER308_03170
Messenger RNA biogenesis [BR:
erz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ER308_03170
Ribosome biogenesis [BR:
erz03009
]
Prokaryotic type
rRNA processing factors
ER308_03170
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
S1
TcdA_TcdB
DUF4371
VMAP-M0
eIF-1a
Motif
Other DBs
NCBI-ProteinID:
QBI18656
UniProt:
A0A411YBT8
LinkDB
All DBs
Position
complement(682026..683300)
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AA seq
424 aa
AA seq
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MSEEARRTIAEGPPRRMLVETGTKRTQIAVLEERDLVEHYVTDRDDTSYVGNIYKGRVQN
VLPGMEAAFIDIGKGRNGVLYAGEVNYDEADLDGEVPRIEQTLKPGQPVLVQVTKDPMGS
KGARLTQSLSIAGRFCVLAPGEGMLGISRKLPDDERERLRGILESVRPEGFGLIVRTAAE
GATHEQLEADVTRLVEKWRIVQDRADKVKPLEPVYEEPGLVIRVIRDIFGPEYTELVVDD
RELAEQVRTYLADVSPEHVDKVRVEEPDDGLFEAYQVTTQIRRALEKKVWLKSGGYLIIE
KTEAMWVIDVNTGKFVGKSNLEETVLRNNLEAAEEIARQLRLRDMGGIIVIDFVDMLVPA
NRDEVLKRFKRALARDKTKSRVMEISKLGLVQMTRKNVSQGLTESFTVECDCCDGRGAQI
VDLG
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaggaggcccgccgcacgatcgcggagggtccgccgcgccgcatgctcgtcgag
acgggcacgaagcgcacccagatcgccgtgctcgaggagcgtgatctcgtcgagcattac
gtcaccgaccgtgacgacacgagctacgtgggcaacatctacaagggccgggtacagaac
gtcctgcccgggatggaggccgcgttcatcgacatcggcaagggccgcaacggcgtgctc
tacgcgggggaggtcaactacgacgaggccgacctcgacggcgaggtcccgcggatcgag
cagaccctgaagcccggccagccggtgctggtgcaggtgaccaaggatccgatgggctcc
aagggcgcacggctgacgcagagcctctcgatcgccgggcggttctgcgtgctcgcgccg
ggcgagggcatgctcgggatcagccgcaagctgcccgacgacgaacgggagcggttgcgg
gggattctggagtccgtgcgccccgagggcttcggactgatcgtgcggaccgccgccgag
ggcgcgacccacgagcagctcgaggcggacgtgacgcgtctggtcgagaagtggcggatc
gtccaggaccgcgccgacaaggtcaagccactcgagccggtctacgaggagcccggcctg
gtcatccgcgtcatccgcgacatcttcggtcctgagtacaccgagttggtcgtcgacgac
cgcgagctcgccgagcaggtccggacgtacctggccgacgtcagcccggagcacgtggac
aaggtccgcgtcgaggagcccgacgacggactgttcgaggcctaccaggtcaccacccag
attcgtcgcgcgctcgagaagaaggtgtggctgaagtccggcggctacctcatcatcgag
aagaccgaggcgatgtgggttatcgacgtgaacaccggcaagttcgtcgggaagtcgaac
ctcgaggaaacggtgctgcgcaacaacctcgaggccgccgaggagatcgcccgccagctg
cggctgcgggacatgggcgggatcatcgtcatcgacttcgtcgacatgctcgtgcccgcc
aaccgcgacgaggtgctcaagcgcttcaagcgcgcgctggcacgagacaagaccaagtcc
cgcgtgatggagatctccaagctcggcctcgtgcagatgacccgcaagaacgtcagccag
ggcctcaccgagtcgttcaccgtcgaatgtgactgctgtgacggccggggtgcccagatc
gtcgatctcgggtga
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