Egibacter rhizosphaerae: ER308_05105
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Entry
ER308_05105 CDS
T05860
Name
(GenBank) hypothetical protein
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
erz
Egibacter rhizosphaerae
Pathway
erz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
erz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ER308_05105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
erz03400
]
ER308_05105
Enzymes [BR:
erz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
ER308_05105
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
ER308_05105
DNA repair and recombination proteins [BR:
erz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ER308_05105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Zn_ribbon_TFIIB
DUF3093
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
QBI18982
UniProt:
A0A411YCU4
LinkDB
All DBs
Position
complement(1091892..1092722)
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AA seq
276 aa
AA seq
DB search
MTQLPEAEVLRKELEKEVVGKRVKDVEVGATRLVQRHRNRPEFVRALTGRKIASVVRRGV
RIVCELDEGQALVVGLGPTGWITRETANADPAGHVRARIWFTTGGALHVADPDDAAELFV
VETASLDGIGELTPTGVDPLANTFTWHAFGSYLAARRRELALLLRDETFVIGLGDRYSDE
VLWAAGLDGARTSNHLSSQEVRRLHRALFEVLYEAVKQGGSGGQEPEGDELDEDEPPAAH
IKVHGRAAQPCPRCRRPIHRDEVDGHPMYHCPSCQT
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
gtgacgcagctgcccgaggcggaggtcctgcgcaaggagctcgagaaggaggtcgtgggc
aagcgcgtcaaggacgtggaggtcggtgcgacccggctcgtgcagcgccaccggaaccgc
ccggagttcgtccgtgctctgacggggcgcaagatcgcgtcggtcgtacggcggggcgtg
cggatcgtctgcgagctggacgagggacaagcgctcgtcgtcggcctcggtccgaccggc
tggatcacccgggagaccgcgaacgcggacccggccggccacgtccgggcccgtatctgg
ttcacgacggggggagccctgcacgtcgccgatcccgacgatgcggccgagttgttcgtc
gtcgagaccgccagcctcgacgggatcggtgagctcactcccaccggggtggatccgctg
gccaacacgttcacgtggcacgccttcgggagctatctcgccgcacgccgccgagagctc
gcgctgctgctgcgggacgagacgttcgtcatcggtctgggtgaccgctacagcgacgag
gtgctgtgggcagcagggctcgatggtgcccggacctcgaaccacctgtcgagccaggag
gtgcgtcggctgcaccgagcgctgttcgaggtcctctacgaagcggtcaagcaggggggc
tccgggggccaggagcccgagggggacgagctcgacgaggacgagccgccggccgcgcac
atcaaggtccacgggcgtgcggctcagccgtgcccccggtgccgccggccgatccatcgg
gacgaggtggacggtcaccccatgtaccactgcccgtcctgccagacctga
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