Egibacter rhizosphaerae: ER308_05630
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Entry
ER308_05630 CDS
T05860
Name
(GenBank) DNA-3-methyladenine glycosylase 2 family protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
erz
Egibacter rhizosphaerae
Pathway
erz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
erz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ER308_05630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
erz03000
]
ER308_05630
03400 DNA repair and recombination proteins [BR:
erz03400
]
ER308_05630
Enzymes [BR:
erz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
ER308_05630
Transcription factors [BR:
erz03000
]
Prokaryotic type
Helix-turn-helix
AraC family
ER308_05630
DNA repair and recombination proteins [BR:
erz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ER308_05630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
DUF7437
Motif
Other DBs
NCBI-ProteinID:
QBI21925
UniProt:
A0A411YL51
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All DBs
Position
1199624..1201177
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AA seq
517 aa
AA seq
DB search
MIDDPERCRRALASRDSRFDGWFVAGVVSTGIYCRPSCPALPPARSAVRFWSTAAAAQQA
GFRPCRRCRPDATPGSPEWDVRGDLVARAMRLIADGLVDREGVNGLARALGYSSRQLHRQ
LTAELGAGAVALARAQRAQTARTLIESSDLPMADVAFAAGFGSVRQFNDTVRAVYATTPG
ALRAQARGQRSGVATSARSLVLRLPYRTPGDVEGTLAFLATRAIPGLEAACADAYTRGMR
LAHGAAVVTLSPRSGGTPHVRATLRLDDLRDLSAAVQRCRRLLDLDADPRTIDDHLSADP
ALAPRVASAPGRRVPGSVDPFETAVRTILGQQVRVEAAREHVRRVTAARGKPLTTPDGQV
THLFPTADALADASLDEIAMPGTRKEALRSLARAVAEGRLDLGPGADRGQTREDLLSVRG
LGAWSVEYMAMRALGDPDALPAGDAGLRHALGIPKGPRAEQEVADRAEDWRPWRAYAAQH
LWSGGSPAGHDHDDRHDTERAASPARGAAIPRERDQR
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgacgatccggaacgctgcagacgagcgctggcgagccgcgacagccgcttcgac
ggctggttcgtcgccggtgtggtctccaccggcatctactgccggccgagctgtcccgcg
ctcccgcccgcccgctcggccgtgcgcttctggtccacggcggccgctgcgcagcaggcg
gggttccggccatgccgtcgctgccgccccgatgcgaccccgggctctcccgagtgggac
gtgcggggtgacctcgttgcacgcgcgatgcggctgatcgccgacgggctcgtggaccgc
gagggcgtcaacgggctcgctcgagcgctcggctacagcagccggcagctgcaccgccag
ctgaccgccgagctcggggccggagccgtggcgctggcccgcgcgcagcgcgctcagacg
gctcgcacgctcatcgagtccagcgacctcccaatggccgacgtcgcgttcgccgcgggc
ttcgggagcgtccggcagttcaacgacacggtccgtgccgtctacgcgaccacgcccggc
gcgctgcgagcgcaggcacgcggtcagcgcagcggcgtcgcgacctccgcacgctcactg
gtgctccgcctgccctaccgaacgcccggcgatgtcgaggggacactcgcgttcctcgcg
actcgggcgattcccggactcgaggccgcgtgcgcggatgcctacacgcgcggaatgcgg
cttgcccacggcgctgcggtcgtcaccctctcgccccgcagtggcggcacaccccatgtg
cgggcaaccctgcggctggacgacctccgcgacctttcggccgcggttcagcgttgccgt
cggctcctggacctcgacgccgatccgcgcacgatcgacgaccacctgagcgccgaccct
gccctcgccccacgggtggcatccgcgcccgggcggcgcgtaccggggagcgtcgatccc
ttcgagaccgcggtccgcacgatcctcggacaacaggttcgtgtcgaggccgcccgcgag
cacgtccgccgggtgaccgccgcgcggggcaagccgctgacgacgcccgacgggcaggtg
acccacctgttcccgaccgccgacgcccttgccgacgcgtcgctcgatgagatcgcgatg
ccggggacccgaaaggaagccctgcgctcgctggcccgcgcggtggccgaggggcgcctc
gatctggggccgggagccgaccgagggcagacccgcgaggatctcctgtcggtccgtgga
ctcggcgcctggtcggtcgagtacatggcgatgcgggcgctcggcgaccccgacgcgctc
ccggccggcgacgcggggctgcgccatgcactcggcatccccaagggcccccgagccgag
caggaggtcgcggatcgcgcggaggactggaggccgtggcgcgcttatgccgcccagcac
ctctggtccggcggctcgccggccggccacgaccacgacgaccgtcacgacaccgaacgc
gcggcatcacccgcaaggggagccgcgatcccgagggagagggaccaacgatga
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