Egibacter rhizosphaerae: ER308_05930
Help
Entry
ER308_05930 CDS
T05860
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
erz
Egibacter rhizosphaerae
Pathway
erz00260
Glycine, serine and threonine metabolism
erz00460
Cyanoamino acid metabolism
erz00630
Glyoxylate and dicarboxylate metabolism
erz00670
One carbon pool by folate
erz00680
Methane metabolism
erz01100
Metabolic pathways
erz01110
Biosynthesis of secondary metabolites
erz01120
Microbial metabolism in diverse environments
erz01200
Carbon metabolism
erz01230
Biosynthesis of amino acids
erz01240
Biosynthesis of cofactors
erz04981
Folate transport and metabolism
Module
erz_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
erz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
ER308_05930
09102 Energy metabolism
00680 Methane metabolism
ER308_05930
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
ER308_05930
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
ER308_05930
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
ER308_05930
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
ER308_05930
Enzymes [BR:
erz01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
ER308_05930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Beta_elim_lyase
Aminotran_1_2
DegT_DnrJ_EryC1
Aminotran_5
Phage_H_T_join
Pyridoxal_deC
Motif
Other DBs
NCBI-ProteinID:
QBI19123
UniProt:
A0A411YD07
LinkDB
All DBs
Position
complement(1265508..1266779)
Genome browser
AA seq
423 aa
AA seq
DB search
MTTWGPDYDALERTDPELAAAIGDELHRQRTYLQLIASENFTTPEVLAAQGSVLTNKYAE
GYPGRRYYGGCEHVDVAEELARDRLTALFGAEHANVQPHSGAQANMAAFTALGLEHGDTL
MAMSLDHGGHLTHGAKVNFSGKWYEIAAYGVDPASEQIDYDEVRRLAREHRPKVILTGYT
AYPRAIDFAAFREIADEVGAKLHVDAAHFCGLVAGGAHPDPVPYADMVTFTTHKTMRGPR
GGAILCGQEYAKAVDKAVFPFLQGGPQMHSIAAKAVAFKQAAQPEFRDYAHQVVTNARAL
AEALEGHGVRIVAGGTDIHYLLADVSAVGEDDNGVEITGKVAEQRLDQAGITLNKNAIPF
DPKPPMVASGVRVGVPSVTTQGMQTAEMREIATLIARVLQDEGEVGAVREEVTKLTGRFP
VYV
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgaccacctggggacccgactacgacgcgctcgagcggaccgaccccgagctcgcggcc
gcgatcggtgacgaactgcaccggcagcggacgtacctgcagctgatcgcgagcgagaac
ttcaccacgccggaggtgctcgcggcgcagggcagcgtgctcacgaacaagtacgccgag
gggtatccggggcgccgctactacggcggctgcgaacacgtcgacgtggccgaggagctc
gcccgggaccggctgaccgcgctcttcggggccgagcacgccaacgtgcagccgcactcg
ggggcgcaggcgaacatggccgcgttcacggcgctcggcctggagcacggcgacaccctc
atggcgatgtcgctcgaccacggtggccacctgacccacggcgcgaaggtcaacttcagc
ggcaagtggtacgagatcgcggcgtacggcgtcgatcccgcctccgagcagatcgactac
gacgaggtccgccggctcgcccgcgagcaccgacccaaggtgatcctcaccggctacacc
gcctacccccgggcgatcgacttcgcggcgttccgtgagatcgccgacgaggtcggcgcg
aagctccacgtcgacgctgcgcacttctgcgggctggtcgccggcggggcgcacccggac
ccggtgccgtacgccgacatggtcacgttcacgacccacaagacgatgcgcgggccccgc
ggcggcgcgatcctctgcgggcaggagtacgccaaggcggtggacaaggcggtcttcccg
ttcctgcagggagggccccagatgcactcgatcgccgcgaaggcggtcgccttcaagcag
gccgcccagccggagttccgggactacgcgcaccaggtcgtgacgaacgcccgcgcgctg
gccgaggccctcgagggccacggcgtgcggatcgtcgccggcggcaccgacatccactac
ctcctcgccgacgtgagcgcggtcggcgaggacgacaacggggtggagatcaccgggaag
gtcgccgagcagcggctcgaccaggccggtatcaccctcaacaagaacgcgatcccgttc
gatcccaagcccccgatggtcgccagcggcgtccgggtcggtgtgccgagcgtcaccacc
caggggatgcagaccgccgagatgcgggagatcgccacgctgatcgcgcgggtcctgcaa
gacgagggcgaggtcggtgcggtccgcgaggaggtcaccaagctcacgggccggttcccg
gtctacgtctga
DBGET
integrated database retrieval system