Egibacter rhizosphaerae: ER308_07895
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Entry
ER308_07895 CDS
T05860
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
erz
Egibacter rhizosphaerae
Pathway
erz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
erz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ER308_07895 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
erz03400
]
ER308_07895 (recC)
Enzymes [BR:
erz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
ER308_07895 (recC)
DNA repair and recombination proteins [BR:
erz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ER308_07895 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
QBI19481
UniProt:
A0A411YE55
LinkDB
All DBs
Position
complement(1701493..1705032)
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AA seq
1179 aa
AA seq
DB search
MDAVVDQRRAEPAAFERSATLLEIVRDHRLEVLVESLAARLRDEPLGDPMVLEPVAVPSR
GSERWLSQRLAERGGRAGLHDGIADGICAGLEFPFPGGLVEHVVEATIGTGAAHSAWRPQ
RLTWPVLEVLDDLAADRGPSRDSRLAPLGEHLTDGGEPALARRLPLARRIADTFDRYALL
RPRMVAAWEAGHDVGPGADLGHAWAGGSPAPRERLDPRWAWQPWLWRHLCERLGTASAAS
RLEHAITALRAGEVDPAGLPPRVSVFGVTALPPAHLRLLSALGEVVDTTVYLLVASPALW
PAAPPTNIDDAMPGELAVAEPDHPLLSSLGGVGLGMGWACASIPSEVRDATRAAGDVDDR
GTLLERVQRDLAADRRPDETPSCARDTTVQIHGCYGPARQVEVLREVLTGLLADHPGGEN
VRALEPRDVLVMTPDLDTYAPLIAAVFDDTSDDTVAGAPPLPARIADRRLDAANEVAVVL
LGLLDLPDARVSASAVLDLLAAAAIRRRFDLEDRDLDALDAWVRATGIRWGIDAEYRASH
GWVQDAAHTWEAGLDRLRLGVAMPDVADRVVGEAVPYDDLEGDDVERFGRVSRALQTVFA
HTRGLREPRSVAQWRDALLDALDAVASVGRDDAWQREQVREVLEGLVDDSRPDPTRRDGS
GAEPPPSPVLLTLTEIRGELAARLGRHPAAAAYATGAITVCEPAPLRAVPHRVVCLLGVD
DEVFPRASSPLGFDLVASAPQPADRDARREDRQLLLDAIMAAREHLVVTYTSHDPRTNEP
SPPCAPVAELLETVACTTGLPARDAGQLVVHHPLHPFDPAYFREGPDDEAGAVPGLRSFD
PQRLAAARAYTEGRRPAGAFLSGGLAGDEPGDEPVTVDLVVLDRFLRNPLRQVLRDRLGL
AIALREGVMDDRDPFELAGLERWSALEEQLERWRGGADLERWREAALRRGAVPAGTPGGY
VLDDVGGDLRALLRGLSAEDVTDPADWAAEPVEVDLALDVDGVAHRLVGTIDERVGERLV
TVQASRLDARASLRAWPRLLAAGVTAGVCEAVVVGRSSQGRGQASSVRLTLPDEAPASYA
RDRLVELLRLLRRGQGEPLPVMPKTGAAYVDRLGREGEAAALKAARTAWDGSRDDGERTD
DAVALALGDDVPLDALIDQAWITAARTIWDPLLDRGGKP
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
gtggacgctgtcgtcgaccagcgacgtgcggaaccagcggcattcgaaaggagcgcgacg
ctgctcgagatcgtgcgtgatcaccgcctcgaggtcctcgtcgagtcgctcgccgcccgg
ctgcgcgacgagcccctgggtgatccgatggtgctcgaaccggtggcggtcccgagccgg
gggtcggagcgctggctgtcccagcgactcgccgagcgggggggtcgtgccgggctccac
gacgggatcgcggacgggatctgcgccgggctcgagttcccgttccccggcgggctcgtc
gagcacgtcgtcgaagccacgatcgggaccggggccgcacactcggcatggcggccccaa
cgcctgacgtggcccgtgctcgaggtgctcgacgacctcgcggccgaccgagggccgtcc
cgggattcgcgcctcgccccgctgggcgagcacctgaccgacgggggggagcccgcgctc
gcccggcggctgcccctcgctcgacggatcgccgacaccttcgaccgctacgcgctgctg
cgcccgcgcatggtcgccgcctgggaggccggacacgacgtcggtcccggagcggacctg
ggccacgcgtgggcgggtggctcgcccgcgccgcgcgaacggctggatccacgctgggct
tggcagccgtggctctggcgccacctctgcgagcgactcggcacggcgagcgcggcgtcc
cggctcgagcacgccatcacggccctgcgcgccggcgaggtcgaccccgccgggctgcct
ccccgcgtcagcgtcttcggggtgactgccctgccccccgcgcacctgcggctgctgtcg
gcgctgggcgaggtggtcgacacgaccgtctacctgctcgtcgcctcgccggcgctctgg
cccgcggcgcctccgacgaacatcgacgatgccatgcccggcgagctcgccgtcgccgag
cccgaccacccgttgctgtcgtcgttgggcggggtcggcctcggcatggggtgggcgtgc
gcctcgatcccctccgaggtgcgcgatgcgacccgcgcggccggggacgtcgacgaccgg
gggacgctgctcgagcgggtgcagcgtgacctcgccgcggaccgccgcccggacgagacg
ccgtcgtgcgcgcgcgacaccaccgtgcagattcacggctgttacggccccgcacggcag
gtcgaggtgctgcgggaggtcctgaccggcctgctcgccgatcatccggggggtgagaac
gtgcgggccctcgagccccgggacgtgctcgtgatgacccccgacctggacacctacgca
ccgttgatcgcggcggtgttcgacgatacgtcggacgacaccgtcgccggcgccccgccg
ctgccggcgcgtatcgccgaccggcgactcgacgccgccaacgaggtcgccgtggtgctg
ctcgggctgctcgacctgcccgacgcacgcgtcagtgcctccgccgtgctcgacctgttg
gccgctgccgcgatccgccgtcggttcgacctcgaggaccgggacctcgatgcactcgac
gcatgggtccgcgcgacggggatccgctggggcatcgacgccgagtaccgggcctcccac
gggtgggttcaggacgcggcccacacctgggaggccgggctcgatcgcttgcggctcggc
gtggcgatgcccgacgtggccgaccgggtcgtcggcgaggccgtgccgtacgacgatctc
gagggcgacgacgtcgagcggttcggtcgcgtgagcagggcactgcaaaccgtgttcgcc
cacacccgagggttgcgcgagccgcggtcggtcgcgcagtggcgggacgcgctcctcgac
gcgctcgacgccgtcgcctcggtcggccgtgacgatgcgtggcagcgcgagcaggtacgc
gaggttctcgaggggctcgtcgacgactcgcggccggatcccacccgtcgcgacgggtcc
ggggccgagcccccgccgagtcccgtcctcctcaccctgaccgagatccgcggcgagctc
gccgccaggctcggacgccacccagcggccgccgcctacgcgaccggtgcgatcaccgtc
tgcgagccggcgccgctgcgtgcggtcccgcaccgcgtggtgtgcttgctcggcgtcgac
gacgaggtgttccctcgcgcgtcctccccgctcggcttcgacctcgtggcgtccgcaccc
cagccggcggaccgtgacgcgcgccgggaggaccgccagctcctgctcgacgcgatcatg
gccgcgcgcgagcacctggtggtgacgtacacgagccacgacccgcgcacgaacgagccg
tccccaccgtgcgccccggtcgccgagctcctcgagacggtcgcgtgcacgaccgggctt
cccgcccgcgacgccgggcagctcgtggtgcaccacccgctgcacccgttcgatcccgcc
tactttcgggagggcccggacgacgaggccggagccgtgcccgggctccggagcttcgac
ccccagcggctggcggccgcccgcgcctacaccgagggacggcggccggccggtgcgttc
ctgtccggggggttggccggcgatgagcccggcgatgagccggtcacggtcgacctcgtg
gtgctcgatcggttcctgcgcaacccgttgcgccaagtgctgcgcgatcgcctgggtctc
gccatcgccttgcgcgagggcgtgatggacgaccgcgaccccttcgaactcgccgggctg
gaacgctggagcgccctcgaggagcagctcgagcgctggcgcgggggagcggatctcgaa
cgatggcgggaagccgcgctgcgtcggggagcggtgccggcgggcacgccgggcgggtac
gtcctggacgacgtcgggggcgacctgcgtgcactgctccgtgggctctcggccgaggac
gtcaccgaccccgccgactgggccgccgagccggtcgaggtcgatctggccctggacgtg
gacggggtcgctcaccggctggtcggcacgatcgacgagcgcgtcggggagcgtctcgtc
accgtgcaggcctcgcggctcgacgcccgagcgtccctgcgggcctggccgcgcctgctc
gccgccggggtgactgccggtgtgtgcgaggcggtcgtcgtcggacgcagttcccagggg
cgcggccaggcgagcagcgtgcgcctcaccctgcccgacgaggcgccggcgtcctacgcc
cgcgaccggctggtcgagctcctgcggctgctccgtcggggccagggcgaaccgctcccg
gtgatgccgaaaaccggggcggcctacgtggaccggctcggtcgggaaggcgaggccgcg
gcgctcaaggcggcgcggaccgcctgggacggctcccgtgacgacggggagcgcaccgac
gacgccgtggcgctcgcgctcggcgacgacgtgccgttggacgccctcatcgatcaggcc
tggatcacggcggcgcggacgatctgggacccgctcctcgaccgtgggggcaaaccgtga
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