Egibacter rhizosphaerae: ER308_08050
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Entry
ER308_08050 CDS
T05860
Name
(GenBank) very short patch repair endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
erz
Egibacter rhizosphaerae
Brite
KEGG Orthology (KO) [BR:
erz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
erz03400
]
ER308_08050
DNA repair and recombination proteins [BR:
erz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
ER308_08050
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vsr
MTES_1575
Motif
Other DBs
NCBI-ProteinID:
QBI19507
UniProt:
A0A411YEI4
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All DBs
Position
complement(1739143..1739577)
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AA seq
144 aa
AA seq
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MADHSLPPGSWASSEASRAVMLGNRGRDTSPELALRRALHRLGYRYRVDHPPIPELRRRA
DLVFTRRRVAVFVDGCYWHGCPQHYGEPSTNAEYWRSKIARNRERDADTDARLRQAGWTP
VRIWEHESVDDAVVKVACALDAPG
NT seq
435 nt
NT seq
+upstream
nt +downstream
nt
atggccgatcacagtcttccacccggctcctgggcctcgtccgaggcctcccgcgcggtg
atgctggggaaccgaggacgagacaccagccctgagctcgcactgcgccgagccttgcac
cgtctcggctaccgctaccgcgtcgaccatcctccgattcccgagctgcggcggcgcgcc
gacctcgtgttcacccgacgccgcgtcgccgtgttcgtcgacggctgctactggcacggg
tgcccccagcactacggcgagccgtccaccaacgccgagtactggcgctcgaagatcgct
cgcaaccgagagcgcgacgccgacaccgacgcgcggctgcgccaggccggctggacgccg
gtgcgcatctgggagcacgagtccgtcgacgacgccgttgtcaaagtcgcctgcgccctc
gacgcccccggctga
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