Egibacter rhizosphaerae: ER308_08220
Help
Entry
ER308_08220 CDS
T05860
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
erz
Egibacter rhizosphaerae
Pathway
erz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
erz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ER308_08220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
erz03019
]
ER308_08220
03400 DNA repair and recombination proteins [BR:
erz03400
]
ER308_08220
Enzymes [BR:
erz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ER308_08220
Messenger RNA biogenesis [BR:
erz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ER308_08220
DNA repair and recombination proteins [BR:
erz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ER308_08220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
QBI19537
UniProt:
A0A411YEL9
LinkDB
All DBs
Position
complement(1772640..1774799)
Genome browser
AA seq
719 aa
AA seq
DB search
MGQRRTERIELNEVTTATRERAATLLCDLAGDDAALRDDQAEAIGALVDECRRALVVQRT
GWGKSAVYFIATRLRRDAGAGPTLLVSPLLALMRDQIAAAQRIGLAAETINSTNVGDWQD
VASRTTDGGVDLLLISPERLNHPGFRRDVLEPLAGHVGMVVIDEAHCISDWGHDFRPDYR
RIRDVLAALPDGTPVLATTATANERVIADVADQLGADPITLRGDLDRASLVLDLRDLGGM
PERLAWLADWVPTTPGSGIVYCLTVADAERAAQFLAAEGLDAVAYTGRTDPAERERIEAL
LVSNEVAVVCATTALGMGYDKPDLAFVAHLGLPASPIAYYQAIGRAGRALDRAEVVALPG
PTDERIWEHFERQALPSESRVREVLDALTAYDEPVSTAKLERDVNLRRTMLELVLKVTDV
DGAVDRVDGGWVATGRPWRPDPERLARVRAAREAEAEAMRTYRARTGCLMAFLRAELDDT
DGRGPDDPAVACGRCARCTGERIGPSAPDPDRVSRAQRSLRGRDVVLDARRQWPVGLADR
RGRLAHPPRPGRALAIGADHGWEHPLDLLLEHAGDPRAGGATAALRSAFAEVLDGLVAVL
ARWDWDRRPTWIATVPSRRRGPMVAAIADELATRGRLERADPLVRVDDTAPQRPRANSSQ
QVSGALAALGTDPDVTLPAGPCLLIDDVAHSRWTVAVAAELLGEAGADEVLPLVLHHDP
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atggggcagcggaggaccgagaggatcgaactgaacgaggtgaccaccgcgacgcgtgag
cgtgccgcgacgttgttgtgcgacctcgccggggacgatgcggcgttgcgagacgaccag
gccgaggcgatcggcgcgctcgtggacgagtgtcgtcgtgcgctcgtggtgcaacggacc
gggtgggggaagtcggcggtctacttcatcgccacccggctgcgccgtgacgcgggggcg
gggccgacgttgctcgtgagcccgctgctcgcgctcatgcgagatcagatcgcggccgcg
cagcggatcggcctcgcggcggagacgatcaactcgaccaacgtgggcgattggcaggac
gtcgccagccgtacgacggacggcggggtcgatctcctgctgatctcccccgagcggctc
aaccatcccgggttccgccgcgacgtgctcgagcccctcgcgggacacgtcggcatggtc
gtcatcgacgaggcgcactgcatcagcgactggggccacgacttccggccggactaccgg
cgcatccgcgacgtgctcgccgcgctgcccgacggcacaccggtgctcgcgaccaccgcg
accgcgaacgagcgcgtcatcgccgacgtcgccgaccagctcggtgccgacccgatcacg
ctccggggcgacctcgaccgcgcgagcctcgtgctcgacctccgcgacctcggcgggatg
cccgaacgcctcgcgtggctcgcggactgggtgcccaccactccgggttcggggatcgtc
tactgcctcactgtcgccgatgccgaacgggccgcgcagttcctcgccgccgagggcctc
gacgcggtcgcgtacaccggccgcacggatcccgcggagcgtgagcggatcgaggccttg
ctcgtgagcaacgaggtggccgtcgtctgcgcgacgaccgcgttggggatgggctacgac
aagcccgatctcgcgttcgtcgcccacctcggcctgccggccagccccatcgcgtactac
caggcgatcgggcgggcgggccgtgcgctcgaccgcgccgaggtggtcgccttgccgggc
cccaccgacgaacgcatctgggagcacttcgaacggcaggcgctcccgtccgagagtcgg
gtccgggaggtgctcgacgcgttgaccgcgtacgacgagccggtgtcgaccgcgaagctc
gaacgcgacgtgaacctgcggcgcacgatgctggagctcgtgctcaaggtcaccgacgtc
gacggcgcggtcgatcgcgtcgacgggggatgggtggcgaccgggcggccgtggcgcccc
gatccggagcggttggcgcgggtgcgagccgcccgagaggccgaggccgaggcgatgcgg
acgtaccgggcccgcaccggttgcctgatggcgttcctgcgggccgagctcgacgacacc
gacggtcggggacccgacgatccggccgtggcctgtggacgctgtgctcgctgcaccggc
gagcgcatcggcccttcggcacctgaccccgatcgcgtgtcgcgggcgcaacgcagcctg
cgcggccgggacgtggtgctcgacgcccggcgccagtggcccgtcgggctcgccgaccgc
cgggggaggctcgcgcacccgccgcggccgggcagagcgttggcgatcggcgccgaccac
gggtgggagcaccccctcgacctcctcctcgagcatgctggcgacccgcgcgcgggcggt
gccacggccgcgctgcgctccgcgttcgccgaagtcctcgacggtctcgtcgcggtcctg
gcgcgctgggactgggaccgccgtcccacgtggatcgccacggtgccctcccgccgccgg
ggcccgatggtcgccgcgatcgccgacgaactcgccacacgtggacgcctggaacgggcc
gacccgttggtccgcgtggacgacaccgcaccgcagcggccccgtgccaactcttctcag
caggtctccggtgccctcgccgccctcgggaccgaccccgacgtgaccctccccgcgggc
ccctgcctgctcatcgacgacgtcgcgcactcccgctggacggtggcggtggccgccgag
ctcctcggcgaggccggcgccgacgaggtgctcccgctcgtgttgcaccacgatccctga
DBGET
integrated database retrieval system
