Egibacter rhizosphaerae: ER308_17415
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Entry
ER308_17415 CDS
T05860
Name
(GenBank) hypothetical protein
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
erz
Egibacter rhizosphaerae
Brite
KEGG Orthology (KO) [BR:
erz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
erz03016
]
ER308_17415
Enzymes [BR:
erz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
ER308_17415
Transfer RNA biogenesis [BR:
erz03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
ER308_17415
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Paralog
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Motif
Pfam:
DNA_pol_A_exo1
HRDC
DNA_pol_A_exoN
Motif
Other DBs
NCBI-ProteinID:
QBI21173
UniProt:
A0A411YIX4
LinkDB
All DBs
Position
complement(3788592..3790310)
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AA seq
572 aa
AA seq
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MGLDVVGMAVSAERVVRHEDARLERPDLADHPPHRLIDVRLPEAVRRVVRRLAHHPGVPV
AEQPGALRAEDVEGGRELLAPDRREPRPDLVGIHAGPHDLTLLTAGTGDDTHAQAAIGCR
RDRAPGADDLIVRVGVHTEQPGSGRCQHGTLPSPTWWPRPFERTRLAAPRSRGVLSSPQR
PGGPVTNTCYRLVDEPRELRSALSSLGDPPEVAVDVERADWNRYFRTAALVQVGASGQVL
LVDPLAIDDLAPLATFLQPRSVILHAMENDLAPLEADDVVPPNVEDTAIAAAILGLPTGL
GALHRELLGIELEADKAAMQRADWEARPLTDAMLAYAAEDVVHLLDLWAALRDRLETSGR
WHWYVQEREAERAQPSVEDRRSWGRLKGIGRLDPRARGRARALWETREELAKSTDTAPSR
IVGDKVIVDLAADPPSSPRQLGARGVRRQAVHRFGDQIVDALARAPEQPLGRRAERRATD
DDRAAAERLRAVRAAIAEELGIDAGVLCPSRTLLDGVLADPGSGEELREALGLRSWQWDL
LREPFCEALGIGPAGTAPERSDRDEERSPDDA
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
gtgggcctggatgtggtcgggatggccgtatccgccgaacgcgtcgtacgtcacgaggac
gctcggctggaacgcccggatctcgcggaccacccgccgcaccgcctcatcgacgttcgc
ctgccagaagcagtccggcgcgtcgttcgacggctcgcccatcatcccggagtcccggta
gccgagcagccgggggccctgcgcgccgaggatgtcgagggaggccgcgagctcctcgcg
ccggaccgccgcgagccgcggccggatctcgtcgggatccatgccggcccccacgatctc
accctcctcaccgccggtacaggtgacgacacccacgcgcaggccgcgatcggctgccgc
cgcgatcgcgcccccggtgccgatgacctcatcgtccgggtgggcgtgcacacagagcag
cccggcagcggcaggtgtcagcacgggacgctcccctctccgacgtggtggcctcggccg
ttcgagcgtacccggcttgccgcgcctcggtcccgcggcgtcctatcctcgccgcagcga
ccaggaggccccgtgaccaacacttgctaccgtcttgtcgacgaaccccgcgagctgcgc
agtgccctgtcgagcctcggcgaccccccggaggtggccgtcgacgtggaacgcgccgat
tggaaccgctacttccggacggccgcgctcgtgcaggtcggcgcgtccggtcaggtcctg
ctcgtcgacccgctcgcgatcgacgacctcgctcccctggcgacgttcctccagccccgc
tccgtcatcctgcacgccatggagaacgacctggccccgttggaggccgacgacgtcgtg
ccccccaacgtggaggacaccgcgatcgccgccgcgatactcgggcttccgaccggcctc
ggcgccctgcaccgcgagctcctgggaatcgaactcgaagccgacaaggcggcgatgcag
cgtgcggactgggaggcgaggccgctgaccgacgcgatgctcgcctacgccgccgaggac
gtcgtgcacctgctcgatctctgggcggcgttgcgtgaccggctggagacctccggccgc
tggcactggtacgtgcaggagcgcgaggccgagcgtgcccagccatcggtcgaggaccgg
cgcagttggggacggctcaagggcatcggccgcctcgacccgcgagcgcgggggcgggcc
cgtgccctgtgggagacccgcgaggaactcgcgaagtccaccgacaccgctccctcgcga
atcgtgggcgacaaggtcatcgtcgacctggccgccgaccctccgagctcgccgcggcag
ctgggtgcgcgtggcgttcgccggcaggcggtccaccggttcggcgaccagatcgtcgac
gcgctggcgcgcgctcccgagcagcccctcgggcggcgggcggagcgccgcgcgaccgac
gacgatcgtgcggccgccgaacgtctgcgggcggtccgtgccgcaatcgccgaggagctc
ggaatcgatgcgggcgtgctgtgcccgagccgcacgctgctcgacggcgtgctcgccgac
ccgggatccggcgaggagttgagggaggccctggggctgcgcagctggcagtgggatcta
ctgcgcgaacccttctgcgaagcgttgggcatcgggcccgcgggaacggctccggagcga
agtgaccgggacgaggaacgctcacccgacgacgcctga
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