Egibacter rhizosphaerae: ER308_19075
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Entry
ER308_19075 CDS
T05860
Symbol
pdxS
Name
(GenBank) pyridoxal 5'-phosphate synthase lyase subunit PdxS
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
erz
Egibacter rhizosphaerae
Pathway
erz00750
Vitamin B6 metabolism
erz01100
Metabolic pathways
erz01240
Biosynthesis of cofactors
Module
erz_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
erz00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
ER308_19075 (pdxS)
Enzymes [BR:
erz01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
ER308_19075 (pdxS)
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GFIT
Motif
Pfam:
SOR_SNZ
ThiG
His_biosynth
Dus
NMO
IGPS
TetR_C_27
Glu_synthase
NanE
Motif
Other DBs
NCBI-ProteinID:
QBI22128
UniProt:
A0A411YLP9
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Position
4155366..4156205
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AA seq
279 aa
AA seq
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MLKGGVIMDVVTAEQARVAEAAGAVAVMALERVPADIRADGGVARMSDPEVINAIQDAVS
IPVMAKVRIGHLVEAQVVQALDVDYIDESEVLTPADEAHHIDKHAFEVPFVCGATDLGEA
LRRIREGAAMVRSKGEAGTGNVVEATRHMRAIGDGIRWLAGLPREERYAAAKQLGAPVDL
VEEVAETGRLPVVLFTAGGIATPADAAFMMQLGADGVFVGSGIFKSAEPERRAQAIVAAT
TSYDDPDVVAKASRGLGTAMVGIEVDADPGAERLADRGW
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgctcaagggcggggtgatcatggacgtcgtcaccgccgagcaggcccgcgtggccgag
gccgcgggcgcggtcgcggtgatggcgctcgaacgggtcccggcggacatccgggccgac
ggtggcgtcgcccggatgagcgatcccgaggtcataaacgcgatccaggacgccgtctcg
atccccgtcatggcgaaggtgcggatcggccacctcgtggaggcccaggtcgttcaggcc
ctcgacgtcgactacatcgacgagtccgaggtgctgacgcccgccgacgaggcgcaccac
atcgacaagcacgccttcgaggtgccgttcgtctgcggcgccaccgacctgggcgaggcg
ctccggcgcattcgcgagggcgccgcgatggtgcgctcgaagggcgaggccgggaccggc
aacgtcgtcgaggcgacgcggcacatgcgcgcgatcggcgacggcatccgctggctcgcg
ggcctgccgcgggaggagcgctacgcggccgcgaagcagttgggcgcgccggtcgacctc
gtcgaggaggtcgccgagaccggccgcctgccggtggtgctcttcacggccggcgggatc
gcgactcctgccgacgcggcgttcatgatgcaactcggcgcggacggcgtgttcgtcggc
tcggggatcttcaagtccgcggagcccgagcggcgggcccaggcgatcgtcgcggcgacg
acgagctacgacgacccggacgtggtcgcgaaggccagccgcggcctcggcacggccatg
gtgggcatcgaggtcgacgccgatcccggagcggagcggctcgccgaccgcggctggtag
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