Egibacter rhizosphaerae: ER308_20035
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Entry
ER308_20035 CDS
T05860
Name
(GenBank) type IIA DNA topoisomerase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
erz
Egibacter rhizosphaerae
Brite
KEGG Orthology (KO) [BR:
erz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
erz03032
]
ER308_20035
03400 DNA repair and recombination proteins [BR:
erz03400
]
ER308_20035
Enzymes [BR:
erz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
ER308_20035
DNA replication proteins [BR:
erz03032
]
Prokaryotic type
DNA Topoisomerases
ER308_20035
DNA repair and recombination proteins [BR:
erz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ER308_20035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
HATPase_c
Toprim
Motif
Other DBs
NCBI-ProteinID:
QBI21629
UniProt:
A0A411YK86
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All DBs
Position
4364895..4366874
Genome browser
AA seq
659 aa
AA seq
DB search
MRGNVSRLTTKGAAPVSAKGGASYDASSISVLEGLEAVRKRPGMYIGSTDSGGLHHLVWE
VVDNAVDEHLAGHAQRIRLAVRTDGGVEVTDDGRGIPVAKHAKERKPAVEVVLTKLHAGG
KFDQQSYAVSGGLHGVGVSVVNALSERTEVEVSRDGVRHAMAFERGKRARALEQVGKSKK
TGTVLRFWPDTTIFDDPVFEGERIATRLRETALLNPGLRIDFVDERDGREESFRFTRGLA
DFVRELSGDDEPLIPRPIEIHRAEEVNGQSLACDIAVTWSGQRNDERMRSYVNVIRTADG
GAHEEGFRKGFTGTLNRWGQANKAFKKGDPALTGDDLREGLRAVVSVKMPDPQFEGQTKG
KLGSAVMRSFVERAVNEALGEWLDQNPTLGRRIVKRAQVAAKAREAARQARDLTRRKGLL
DQTSSGLPGKLADCSSRNPAECELYIVEGDSAGGSSKLARDRHTQAILPLRGKVLNVERA
QMQKVLANAEIQNLVRAIGTGIGDDFDYAKLRYHKVVILSDADVDGGHITTLLLTFFYRL
MPKLVDGGHLFVAQPPLWLLRKGDLVRYAMTDRERDKLLRTDFKNKGKVEPQRFKGLGEM
NPQQLWDTTMDPATRTLLRVSVDDAQHADETFGLLMGESAADRRTWIEANARYADNVDV
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgcgggggaatgtgtcccggttgacgacgaagggagcggccccggtgagcgccaagggt
ggagcgtcgtacgacgcgtcctcgatcagtgtcctcgagggactcgaggcggtccgcaag
cggcccgggatgtacatcgggtcgaccgattcggggggcttgcaccacctggtctgggag
gtcgtcgacaacgccgtcgacgagcacctggccgggcacgcccagcgcattcgcctcgcg
gtccgcaccgacggaggggtcgaggtgaccgacgacggccgcgggatcccggtcgccaag
cacgccaaggagcgcaagccggcggtcgaggtcgtgctgaccaagctccacgccgggggg
aagttcgatcagcagagctacgcggtcagcggcggtctgcacggggtgggtgtgtcggtc
gtcaacgccctgagcgagcgcaccgaggtcgaggtcagccgcgatggcgtccggcacgcg
atggcgttcgagcggggcaagcgcgcccgcgcgctggagcaggtcggaaagagcaagaag
accggcaccgtgctgcggttctggccggacaccacgatcttcgacgacccggtgttcgag
ggcgagcgcatcgcgacccggctgcgggagaccgcactgctcaacccggggctgcggatc
gacttcgtcgacgagcgcgacggccgtgaggagagcttccgcttcacgcgcgggctcgcc
gacttcgtgcgcgagctgtcgggtgacgacgagccgttgatcccgcggccgatcgagatc
caccgcgccgaggaagtgaacggccagtcgctggcctgcgacatcgcggtcacgtggtcg
gggcaacgcaacgacgagcggatgcgcagctacgtgaacgtgatccggaccgccgacggg
ggcgcccacgaggagggcttccgcaagggcttcaccggcacgctgaaccgctggggtcag
gccaacaaggcgttcaagaagggcgacccggccctcaccggcgacgacctgcgcgaggga
ctgcgcgcggtcgtgagcgtgaagatgcccgacccccagttcgaggggcagaccaagggc
aagctcggcagcgcggtcatgcgctcgttcgtcgagcgcgcggtgaacgaggcgctcggc
gagtggctcgaccagaaccccaccctgggacggcggatcgtgaagcgcgcgcaggttgcg
gcgaaggcccgcgaggcggcgcggcaggctcgggacctcacccgacgcaaggggctgctc
gaccagacctcgtcggggctccccggcaagctggccgactgctcctcgcgcaacccggcc
gagtgcgagctctacatcgtcgagggggactcggccgggggatcgtcgaagctcgcgcgg
gaccggcacacccaggcgatccttccattgcgcggcaaggtcctgaacgtcgagcgcgcg
cagatgcagaaggtgctcgcgaacgcggagatccagaacctcgtgcgtgcgatcggcacc
ggcatcggcgacgacttcgactacgcgaagctgcgttaccacaaggtcgtgatcctctcc
gatgccgacgtcgatggggggcacatcacgaccctgctgctcacgttcttctaccgcctc
atgcccaagctcgtcgacggggggcacctgttcgtggcgcagcccccgctgtggttgctg
cggaagggcgacctcgtgcggtacgccatgaccgatcgggaacgcgacaagctcctgcgc
accgacttcaagaacaagggcaaggtcgagccgcagcggttcaagggcctcggcgagatg
aacccgcagcagctgtgggacacgaccatggacccggccacgcggacgttgctgcgggtg
tcggtggacgacgcgcagcacgccgacgagacgttcggtctgctgatgggcgagtcggcc
gccgaccggcgcacgtggatcgaggctaacgcccgctacgccgacaacgtcgacgtctga
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