Cronobacter sakazakii ATCC BAA-894: ESA_00065
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Entry
ESA_00065 CDS
T00586
Name
(GenBank) hypothetical protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
esa
Cronobacter sakazakii ATCC BAA-894
Brite
KEGG Orthology (KO) [BR:
esa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
esa03016
]
ESA_00065
Enzymes [BR:
esa01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
ESA_00065
Transfer RNA biogenesis [BR:
esa03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
ESA_00065
Prokaryotic type
tRNA splicing ligases
ESA_00065
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RtcB
DUF4514
Motif
Other DBs
NCBI-ProteinID:
ABU75370
UniProt:
A7MPD3
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All DBs
Position
48321..49547
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AA seq
408 aa
AA seq
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MQENSYQTLAQANGAPVKMWTHGVPVEPEAREQLLKTAKMPFIFKHLAVMPDVHLGKGST
IGSVIPTKGAIIPAAVGVDIGCGMIAVRTSLVARDLPDNLSGLRSAIEQAVPHGRTTGRG
QRDKGAWSNTPQDVDHHWASLAPRFKRLTDKYPNLLKTNNHQHLGTLGTGNHFIEICLDE
QERVWVMLHSGSRGVGNAIGTHFIGLAQKDMQRHMANLPDRDLAYFEEGSKHYADYIEAV
EWAQDFARQNREVMMNRVLAALSSIITKPFMTQQEAVNCHHNYVQKETHFGEEILVTRKG
AVSAQKGQMGIIPGSMGAKSFIVRGLGNEESFCSCSHGAGRAMSRTAAKKRFTVEDQIRA
TAHVECRKDSDVIDEIPMAYKDIDAVMAAQSSLVEIVHTLRQVVCVKG
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgcaagagaatagctatcagacgctggcgcaggctaacggcgcgccggtaaaaatgtgg
acccacggcgtgccggtagagccggaagcgcgtgagcagctgctgaaaacggcgaaaatg
ccgtttatttttaaacacctggcggtgatgccggatgtgcatctgggtaaaggctcgacc
atcggcagcgtgatcccgaccaaaggggcgattatcccagcggcggtgggcgtggatatc
ggctgcgggatgatcgcggtgcgcacgtcgctcgtggcgcgcgatctgccggataacctg
agcgggctgcgcagcgccatcgaacaggccgtcccgcacgggcgcaccacagggcgcggc
cagcgtgataaaggcgcgtggtcgaacacgccgcaggatgtggatcaccactgggcatcg
cttgcgccgcgctttaaacgcctgacggataaataccccaacctgttgaagactaacaat
catcagcatctgggaacgctcggaacgggtaatcactttatcgagatctgccttgatgaa
caggagcgcgtgtgggtgatgctgcacagcggatcgcgcggcgtgggtaacgccatcggc
acccatttcatcgggcttgcgcagaaagatatgcagcgccatatggcgaatctgccggac
cgcgatctcgcctattttgaagaaggcagcaagcactacgccgattacatcgaggcggtg
gagtgggcgcaggatttcgcgcgccagaaccgcgaagtgatgatgaaccgcgtgctggcg
gcgctttcctcgattatcacgaagccgtttatgacgcagcaggaggccgtgaactgccac
cataactatgtgcagaaagagacgcattttggtgaagagatcctggtgacgcgcaaaggc
gcggtgtcggcgcaaaaaggccagatgggcatcattccgggctctatgggtgccaaaagc
tttatcgtgcgcgggctgggaaacgaagagagcttttgttcatgcagtcacggcgcaggg
cgcgcgatgagccgtaccgcggcgaaaaaacgcttcacggtggaagatcaaatccgcgcc
acggcgcacgtggagtgccgtaaagacagcgatgtcattgatgagatcccgatggcgtat
aaagacatcgacgccgtgatggccgcgcagtcgtcgctggtggaaattgtgcatacgctg
cgtcaggtcgtgtgcgtgaaaggataa
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