Cronobacter sakazakii ATCC BAA-894: ESA_02548
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Entry
ESA_02548 CDS
T00586
Name
(GenBank) hypothetical protein
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
esa
Cronobacter sakazakii ATCC BAA-894
Pathway
esa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
esa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ESA_02548
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
esa03019
]
ESA_02548
Enzymes [BR:
esa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ESA_02548
Messenger RNA biogenesis [BR:
esa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ESA_02548
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
HI1480
Motif
Other DBs
NCBI-ProteinID:
ABU77793
UniProt:
A7MJ24
LinkDB
All DBs
Position
complement(2504616..2506040)
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AA seq
474 aa
AA seq
DB search
MSFDSLGLSPEILRAIAEQGYNEPTPIQRQAIPVVLSGKDLMASAQTGTGKTAGFTLPLL
QRLTANQPHPKGRRPVRALILTPTRELAAQVGENVREYSKYLDIRSLVVFGGVSINPQMM
KLRGGVDVLIATPGRLLDLEHQNAVKLDQVEVLVLDEADRMLDMGFIHDIRRVLAKLPPK
RQNLLFSATFSDDIKSLAEKLLHNPEEVEVARRNTASEQVTQHVHFVDKKRKRELLSYLI
GDGNWQQVLVFTRTKHGANHLAEQLNKDGITAAAIHGNKSQGARTRALADFKTGGIRVLV
ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI
ERLLKREIPRMAIPGYEPDPSIPAEPIVNGRQSRGGRGGQGGGGRGQGQPRRQNGEGNRS
SGERSRPAGERGRRQDGEGNRPSGERSRRPAGEGNRPAGNKPRTRRAPRKAAGD
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgattcactgggcttaagccctgagatcctgcgcgccattgccgagcagggt
tacaacgaaccgactccgatccagcgccaggccattccggtggtgctttcaggcaaagat
ttgatggccagcgcccagaccggcaccggcaaaaccgcaggctttacgctgccgctgctg
caacgcctgacggcgaaccagccgcacccgaaaggccgtcgcccggtgcgcgcgctgatc
ctgaccccgacgcgtgaactcgcagcccaggtgggcgagaacgtgcgcgaatacagcaaa
tatctcgacatccgctcgctggtcgtgtttggcggcgtgagcatcaacccgcagatgatg
aaactgcgcggcggcgtggacgtgcttatcgcaacgccgggccgtctgctcgatctcgaa
catcagaacgccgtgaagcttgaccaggtggaagtgctggtgctggatgaagccgaccgt
atgctggacatgggctttattcacgatatccgccgcgtgctggcgaaactgccgccgaag
cgtcagaacctgctgttctccgcgaccttctccgacgacattaaatcgctcgcggaaaaa
ttgctgcataacccggaagaagtggaagtggcgcgccgcaacaccgcctctgagcaggtg
acgcagcatgtgcatttcgtggataaaaaacgcaagcgggagctgctttcttatctgatt
ggcgacggcaactggcagcaggtgctggtgtttacgcgtaccaaacacggcgctaaccat
ctggcggaacagctgaataaagacggtattaccgccgcggctatccacggtaacaaaagc
cagggcgcccgtacccgcgcgctggcggatttcaaaaccggcggcattcgcgtgctggtg
gcaacagacatcgctgcgcgtggtctggatatcgaagagctgccgcacgtggtgaactat
gagctgccgaacgtgccggaagattacgttcaccgtatcggccgtaccgggcgtgccgcc
gcgaccggcgaagcgctgtcactggtgtgcgtcgatgagcataagctgctgcgcgatatt
gaacgcctgctgaagcgcgagatcccgcgcatggctattccgggctacgagccggatccg
tctatcccggcggagcctatcgtgaacggtcgccagagccgcggcggacgcggtggtcag
ggcggcggcggtcgtggtcagggccagccgcgtcgtcagaacggcgaaggtaaccgttca
tcgggcgaacgcagccgtccggccggtgagcgcggtcgtcgtcaggatggcgaaggcaat
cgtccgtcgggtgaacgttcacgtcgcccggcaggcgagggcaaccgcccggcaggcaac
aaaccgcgcacccgtcgcgcgccgcgtaaagcggccggggattaa
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