Cronobacter sakazakii ATCC BAA-894: ESA_03738
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Entry
ESA_03738 CDS
T00586
Name
(GenBank) hypothetical protein
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
esa
Cronobacter sakazakii ATCC BAA-894
Pathway
esa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
esa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ESA_03738
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
esa03019
]
ESA_03738
03400 DNA repair and recombination proteins [BR:
esa03400
]
ESA_03738
Enzymes [BR:
esa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ESA_03738
Messenger RNA biogenesis [BR:
esa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ESA_03738
DNA repair and recombination proteins [BR:
esa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ESA_03738
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Cas3-like_C_2
DUF6972
Motif
Other DBs
NCBI-ProteinID:
ABU78935
UniProt:
A7MQK9
Structure
PDB
PDBj
LinkDB
All DBs
Position
complement(3678533..3680362)
Genome browser
AA seq
609 aa
AA seq
DB search
MAQAEVYSQETLAKQVLQETFGYQQFRPGQATIIDAVLEGRDCLVVMPTGGGKSLCYQIP
ALVKTGLTIVVSPLISLMKDQVDQLLANGVAAACLNSTQSREEQQAVLAGCRTGQVRLLY
IAPERLMMDNFIDTLGYWDLAMVAVDEAHCISQWGHDFRPEYAALGQLRARFPAVPFMAL
TATADDTTRRDIVRLLGLDDPLIEISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGI
IYCNSRAKVEDTAARLQSRGISAAAYHAGLEHEVRASVQEKFQRDDLQIVVATVAFGMGI
NKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKAPGPL
QDIERHKLNAMGAFAEAQTCRRLVLLNYFGEGRQAPCGNCDICLDPPRRYDGLVDAQKAL
SAIARVEQRFGMGYVVEVLRGANNQRIRELGHDKLKVYGIGRDQSQEHWVSVIRQLIHLG
VVTQNIAQHSALQLTEAARPFLRGEAPLMLAVPRVAALKPRVAQKSYGGNYDRKLFAKLR
KLRKAIADEENIPPYVVFNDATLIEMAEQMPLSPGEMLGINGVGTRKLERFGRPFMTLIR
EHVDGDDEE
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
gtggcgcaggcggaagtttacagtcaggaaacgctggctaagcaggttttacaggaaacc
tttggctatcagcagttccgtccaggccaggccaccattatcgacgcggtgcttgaaggg
cgcgactgcctggtggtgatgcccaccggcggcggcaaatcgctgtgttatcaaatcccg
gcgctggtgaaaaccggcctgaccatcgtggtttctccactgatttctctgatgaaagac
caggtcgatcagcttctggcgaacggcgtggccgcggcgtgcctcaattcgacgcagagc
cgcgaggagcagcaggcggtgctggcgggctgtcgtaccggccaggtgcgcctgctctac
atcgcgccggaaagactgatgatggataacttcatcgacacgctgggctactgggatctg
gcgatggtggcggtggatgaggcgcactgtatctcccagtggggccacgatttccgcccg
gaatacgcggcgctcggccagctgcgcgcgcgtttcccggcggtgccgtttatggcgctc
accgcgacggcggatgacacgacgcggcgcgatatcgtgcgtcttctgggccttgacgat
ccgctgattgaaatcagcagtttcgaccgcccgaacatccgctacatgctgatggaaaaa
ttcaaaccgctcgatcagctgatgcgctatgtgcaggagcagcgcggcaaatccggcatt
atctactgcaacagccgcgccaaagtggaagacaccgccgcgcgtctgcaaagccgcggc
atcagcgccgccgcctaccacgcaggccttgagcatgaggtgcgcgcgtcggtgcaggag
aaattccagcgcgacgatttacagattgtggtggcgaccgtagcgttcggtatgggcatc
aacaaacccaacgtgcgctttgtcgtgcacttcgatattccccgcaatattgaatcctac
tatcaggagacgggtcgcgccgggcgcgacggcctgcctgccgaagcgatgctgttttac
gatccggcggatatggcgtggctgcgccgctgtctggaagaaaaagcgcctggcccgctg
caggatatcgagcgtcacaagctaaacgcgatgggcgcgttcgccgaggcgcaaacctgc
cgccgtctggtgctgctgaactatttcggcgaagggcgtcaggcaccgtgcggcaactgc
gatatctgtctcgatccgccgcgccgctacgatggcctggtggatgcgcaaaaagcgctg
tcggctatcgcgcgcgtggagcagcgcttcgggatgggctatgtggtggaagtgttgcgc
ggcgcgaataaccagcgcatccgcgaactgggccacgacaagctcaaggtgtacggcatc
gggcgcgatcagagccaggagcactgggtcagcgttatccgccagcttatccatctgggc
gtggtgacgcagaacattgcgcagcactcggcgttgcagttgaccgaagccgcgcgcccg
ttcctgcgtggcgaagcgccgctgatgctggcggtgccgcgcgtcgcggcgctcaaaccg
cgcgtggcgcaaaaatcgtacggcggcaattacgaccgcaagctgtttgcgaaactgcgc
aaactgcgtaaggccatcgccgacgaagaaaacattccaccgtatgtcgtctttaacgac
gcgacgctgattgaaatggccgagcaaatgccgctcagccccggcgaaatgctcggcatt
aacggcgtcggcacccgtaaactggagcgcttcggcaggccgtttatgacgctcatccgc
gagcacgttgacggcgacgacgaagagtag
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