Enterobacter lignolyticus SCF1: Entcl_0113
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Entry
Entcl_0113 CDS
T01342
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
esc
Enterobacter lignolyticus SCF1
Pathway
esc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
esc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Entcl_0113
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
esc03400
]
Entcl_0113
Enzymes [BR:
esc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
Entcl_0113
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Entcl_0113
DNA repair and recombination proteins [BR:
esc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Entcl_0113
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
ADO46391
UniProt:
E3G973
LinkDB
All DBs
Position
115674..116483
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AA seq
269 aa
AA seq
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MPELPEVETSRRGIEPHLVGATILHAVVRNERLRWPVSAEIHSLSDKPVLSVQRRAKYLL
LELPDGWIIIHLGMSGSLRILPDDLPPEKHDHVDLVMSNGKVLRYTDPRRFGAWLWTKTL
EGHPVLAHLGPEPLSDAFNVDYLREKCTKKKTAIKPWLMDNKLVVGVGNIYASESLFAAG
IHPDRLASSLSADECERLVRAIKTVLKRSIEQGGTTLKDFLQSDGKPGYFAQELQVYGRK
DEPCRVCGTPITATKHAQRATFYCRRCQK
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattacctgaggtggaaaccagccgccgcggcattgaaccgcatctggtcggc
gccactatcctccacgccgtggtacgaaacgaacgtctgcgctggccggtctcggctgaa
atccacagcctgagcgacaagccggtgctcagcgtacagcgacgcgccaaatatctcctg
cttgaactgcccgacggctggataatcatccatctcggcatgtccggcagcttacgtatc
ctccctgacgacctgccgccggaaaagcatgaccacgttgatctggtgatgagcaacggc
aaagtgctgcgctacaccgaccctcgccgctttggcgcgtggctgtggacgaaaacgctg
gaggggcaccctgtgctggcgcatctcgggccggagccgctcagcgacgcgtttaacgtc
gattacctgcgagagaagtgcacaaagaagaaaaccgcgattaagccctggctgatggat
aacaagctggtggtcggcgtggggaatatctacgccagcgaatccctcttcgccgccggg
atccatccagacaggctggcgtcgtcgctctcggctgacgaatgcgagcggctggtacgg
gcgattaaaacggtgctcaagcgctcgattgagcagggcggaacgacgcttaaagatttt
ctgcaaagcgacggcaagccgggctactttgcccaggagctgcaggtgtatggccgtaaa
gacgagccgtgccgggtatgcggtacgccgattacggcgaccaaacacgcgcagcgggcg
acgttctattgccgccgctgccagaagtag
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