Enterobacter lignolyticus SCF1: Entcl_0533
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Entry
Entcl_0533 CDS
T01342
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
esc
Enterobacter lignolyticus SCF1
Pathway
esc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
esc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Entcl_0533
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
esc03019
]
Entcl_0533
03016 Transfer RNA biogenesis [BR:
esc03016
]
Entcl_0533
Enzymes [BR:
esc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Entcl_0533
Messenger RNA biogenesis [BR:
esc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Entcl_0533
Transfer RNA biogenesis [BR:
esc03016
]
Prokaryotic type
tRNA degradation factors
Entcl_0533
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
S1_2
KH_2
aRib
OB_RRP5_4th
KH-I_KHDC4-BBP
S1_RRP5
KH_SLS1_2
DUF4172
DUF5813
Motif
Other DBs
NCBI-ProteinID:
ADO46810
UniProt:
E3G0Y6
LinkDB
All DBs
Position
553543..555678
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AA seq
711 aa
AA seq
DB search
MLNPIVRKFQYGQHTVTLETGMMARQATAAVMVSMDDTAVFVTVVGQKKAKPGQDFFPLT
VNYQERTYAAGKIPGGFFRREGRPSEGETLIARLIDRPVRPLFPEGFVNEVQVIATVVSV
NPQVNPDIVAMIGASAALSLSGIPFNGPIGAARVGYINDQYVLNPTPEELKVSKLDLVVA
GTEAAVLMVESEAELLSEDQMLGAVVYGHEQQQIVIQNINELVKEAGKPRWDWQPEAVNE
ALNARVAALAESRLSEAYRITDKQERYAQVDVIKSETIDTLVAEDETLDANELGEILHAI
EKNVVRSRVLAGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTAR
DAQIIDEIMGERTDTFLFHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVLAVMPTMEQ
FPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPVKSAVAGIAMGLVKEGDNFVVLSD
ILGDEDHLGDMDFKVAGSRDGISALQMDIKIEGITKEIMQVALNQAKGARLHILSVMEQA
INAPRGDISEFAPRIHTIKINPDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAAT
DGDKAKHAIRRIEEITAEIEVGRIYNGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVE
KVTDYLQMNQEVPVKVLEVDRQGRIRLSIKEATEQSQPAVAPEAPVAEQGE
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
ttgttaaatccgatcgttcgtaaattccagtacggtcagcataccgttacgctggaaacc
ggcatgatggcacgtcaggcgacggcagccgttatggtgagcatggatgacaccgccgtt
ttcgtgaccgttgttggtcagaaaaaagcaaaaccgggccaggacttcttcccgctgacc
gttaactaccaggagcgtacctacgcggccggtaaaatcccgggtggtttcttccgtcgt
gaaggccgtccaagcgaaggcgaaaccctgatcgcgcgtctgattgaccgcccggttcgt
ccgctgttcccggaaggcttcgtgaacgaagttcaggttatcgccaccgtggtttccgtt
aacccgcaggttaacccggatatcgtggcgatgattggcgcctctgccgcactgtctctg
tccggtattccgttcaacggcccaatcggcgctgcgcgcgtgggttatatcaatgaccag
tacgtactgaacccgacgccggaagagctgaaagtcagcaaactggatctggtggttgcc
ggtaccgaagcggccgtgctgatggtggaatccgaagccgagctgctgagcgaagaccag
atgctgggcgcggtcgtttacggccacgagcagcagcagatcgttatccagaacatcaac
gagctggtgaaagaagctggcaaaccgcgttgggactggcagccggaagcggttaacgaa
gcgctgaacgcccgcgttgccgcactggctgaatctcgcctgagcgaagcctaccgcatc
accgacaagcaggagcgttatgctcaggttgacgtcatcaaatccgaaaccatcgacacg
ctggttgcggaagatgaaaccctggacgctaatgagctgggtgaaatcctgcacgctatc
gagaaaaacgtcgttcgtagccgcgtactggcaggcgagccgcgcatcgatggccgcgaa
aaagacatgatccgtggtctggacgttcgtaccggcgtgctgccgcgtactcacggctcc
gcactgttcacccgtggtgaaacgcaggcgctggttaccgcgacgctgggtaccgcccgt
gacgcgcagatcatcgatgaaatcatgggtgagcgtactgacaccttcctgttccactac
aacttccctccgtactctgtcggcgaaaccggcatggtcggttcaccgaagcgtcgtgaa
atcggtcacggtcgtctggcgaagcgcggcgttctggccgttatgccgacgatggaacag
ttcccgtacaccgttcgcgtggtgtctgaaatcaccgaatccaacggctcttcttccatg
gcttccgtgtgcggcgcgtctctggcgctgatggacgcaggcgtgccggtgaaatccgcc
gttgcgggtatcgcgatgggtctggtgaaagaaggcgacaacttcgtagtgctgtccgat
atcctgggcgatgaagaccacctgggcgacatggacttcaaagttgcgggttcccgcgac
ggtatctctgcgctgcagatggatatcaaaattgaaggcatcaccaaagagatcatgcag
gttgcgctgaaccaggctaaaggcgcgcgtctgcatatcctgagcgtgatggagcaggcg
atcaacgcaccgcgtggcgatatctctgaattcgcaccgcgtattcacaccatcaagatc
aacccggacaagatcaaagacgtgatcggcaagggtggttctgtgattcgtgcgctgacc
gaagagaccggcaccaccatcgaaatcgaagacgacggtactgtgaagatcgcagcgacc
gacggcgacaaagcgaaacacgctatccgccgtatcgaagagatcaccgcagagatcgaa
gtgggccgcatctacaacggtaaagtcacccgtatcgtagacttcggcgccttcgtcgct
atcggcggcggcaaggaaggtctggtacacatttctcagattgccgacaagcgcgttgag
aaagtgaccgactacctgcagatgaatcaggaagtaccggttaaggttctggaagtcgat
cgtcagggccgtatccgtctgagcattaaagaagcgaccgagcagtctcagccagcagtc
gcgccggaagctccggtagcagaacaaggcgagtaa
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