Enterobacter lignolyticus SCF1: Entcl_0663
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Entry
Entcl_0663 CDS
T01342
Name
(GenBank) protein of unknown function UPF0027
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
esc
Enterobacter lignolyticus SCF1
Brite
KEGG Orthology (KO) [BR:
esc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
esc03016
]
Entcl_0663
Enzymes [BR:
esc01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
Entcl_0663
Transfer RNA biogenesis [BR:
esc03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
Entcl_0663
Prokaryotic type
tRNA splicing ligases
Entcl_0663
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
DUF4514
Motif
Other DBs
NCBI-ProteinID:
ADO46939
UniProt:
E3G2K0
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All DBs
Position
complement(691958..693184)
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AA seq
408 aa
AA seq
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MPHNEYELLASQNAAPVKMWTHGVPVEPEARQQLLNTAKMPFIFKHLAVMPDVHLGKGST
IGSVIPTKGAIIPAAVGVDIGCGMIAVRTSLLAGDLPDNLNGLRSAIEQAVPHGRTNTRS
RRDKGAWETPPEEVSAHWGQLAPRFKRLTDKYPQLLKTNNHQHLGTLGTGNHFIEVCLDE
QQRVWVMLHSGSRGVGNAIGNVFITLAQQDMQQHIANLPDRNLAYFQEGSRHYDDYIEAV
EWAQDFARQNREVMMSRVLAALSRIVSKPFMTQQEAVNCHHNYVQKEHHFGEEVLVTRKG
AVSAQKGQMGIIPGSMGAKSFIVRGLGNEESFCSCSHGAGRTMSRTAAKKRFTVADHIRA
TAHVECRKDSEVIDEIPMAYKDIDAVMAAQASLVEVVHTLRQVVCVKG
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgccgcataacgagtatgagcttttggcgtcgcaaaacgcggcgccggtgaaaatgtgg
acccacggggtccctgtggaacctgaggcgcgccagcaattgctgaatacggcgaaaatg
ccgtttatttttaaacatctggcagtgatgccggatgtgcatctcggcaaagggtcaacc
attggcagcgttatcccgaccaaaggggcgattattcctgcggcggtaggggtggatatt
ggctgcggcatgatagccgtgcgcacctcgctcctggctggcgatttgccggataacctc
aacgggctgcgtagcgcgattgagcaggcggtgccacatgggcgcaccaatacgcgttcc
cgtcgcgataaaggcgcatgggaaacaccgccggaagaagtgagtgctcactgggggcaa
ctggcgccgcgttttaaacgcctgaccgataaatacccgcagttgctgaaaaccaataac
catcagcatctgggaacgttaggaaccggcaaccactttattgaggtgtgcctggatgaa
caacaacgcgtatgggtgatgctgcacagcggctcccgtggcgtggggaatgccatcggg
aacgtgtttatcacgctggcgcagcaggatatgcagcagcatattgcgaacctgccggac
agaaacctggcctatttccaggaagggagtcgtcattatgacgattacattgaagcggtg
gagtgggcgcaggatttcgcccggcaaaatcgggaagtgatgatgtcccgcgtgctggcg
gcactgtcacgtatcgtcagcaaaccgtttatgacccaacaagaggcggtgaattgccat
cacaactatgtccagaaagaacaccattttggcgaagaggtgctggtgacgcgtaaaggc
gcggtttcggcgcagaaaggccagatggggattatccccggttcaatgggggcaaaaagt
tttatcgtgcgcggactggggaatgaagagagtttctgctcctgtagtcatggcgccgga
agaaccatgagccggacagcggccaaaaaacgtttcaccgtggccgatcacatccgcgca
actgcccatgttgaatgccggaaagacagcgaggtgatcgatgaaattccgatggcttac
aaagacattgatgccgttatggcggcgcaggcttcgctggtggaggtggttcacaccttg
cggcaggtcgtgtgtgtaaaaggataa
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