Enterobacter lignolyticus SCF1: Entcl_0696
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Entry
Entcl_0696 CDS
T01342
Name
(GenBank) RNA polymerase, sigma 70 subunit, RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
esc
Enterobacter lignolyticus SCF1
Pathway
esc02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
esc00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Entcl_0696
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
esc03021
]
Entcl_0696
Transcription machinery [BR:
esc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Entcl_0696
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r1_1
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
DNA_ligase_A_N
HTH_SUN2
TMEM120A-B
ZrgA
Motif
Other DBs
NCBI-ProteinID:
ADO46971
UniProt:
E3G2N2
LinkDB
All DBs
Position
complement(726532..728376)
Genome browser
AA seq
614 aa
AA seq
DB search
MEQNPQSQLKLLVTRGKEQGYLTYAEVNDHLPEDIVDSDQIEDIIQMINDMGIQVMEEAP
DADDLMLAENTADEDAAEAAAQVLSSVESEIGRTTDPVRMYMREMGTVELLTREGEIDIA
KRIEDGINQVQCSVAEYPEAITYLLEQYDRVEAAEARLSDLITGFVDPNAEEDMAPTATH
VGSELSQEEMDDDDEEDEDEDSDSDSSDDDNSIDPELAREKFGELRAQYEVTRDTIKAKG
RSHAAAQEEILKLSEVFKQFRLVPKQFDYLVNSMRTMMERVRIQERIIMKLCVEQCKMPK
KNFITLFTGNETSETWFNAAIAMNKPWSEKLHDVTEDVQRSLQKLQQIEEETGLTIEQVK
DINRRMSIGEAKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKF
EYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRISRQMLQEMGREPT
PEELAERMLMPEDKIRKVLKIAKEPISMETPIGDDEDSHLGDFIEDTTLELPLDSATTES
LRAATHDVLAGLTAREAKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLR
HPSRSEVLRSFLDD
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaaacccgcagtcacagctgaagcttcttgtcacccgtggtaaggagcaaggc
tatctgacctatgccgaggtcaatgaccatctgccggaagatatcgtcgactccgatcag
atcgaagacatcatccaaatgatcaacgacatgggcattcaggtgatggaagaagcaccg
gatgccgatgatctgatgctcgccgaaaacaccgcggacgaagatgctgccgaagctgcc
gcgcaggtgctttccagcgttgaatctgaaatcgggcgcaccaccgacccggtacgcatg
tacatgcgtgaaatgggtaccgttgagctgctgacccgcgaaggcgaaatcgatatcgcc
aaacgtattgaagatggcatcaaccaggtccagtgctccgttgccgaatacccggaagcg
atcacctacctgcttgagcagtatgaccgcgttgaagcggctgaagcccgtctttccgat
ctgatcaccggttttgtcgacccgaacgccgaagaagacatggcgcctaccgccacgcac
gtcggttccgagctgtctcaggaagagatggatgacgacgatgaagaagatgaagacgaa
gacagcgacagcgattccagcgacgacgacaacagcatcgacccggagctggcccgcgag
aaattcggcgagctgcgcgcccagtatgaagtgacgcgtgacaccatcaaagccaaaggc
cgcagccacgctgccgctcaggaagagatcctgaagctttccgaggtgttcaagcagttc
cgcctggtgccgaaacagttcgattatctggtcaacagcatgcgtaccatgatggagcgc
gttcgtattcaggaacgtatcatcatgaagctgtgcgttgagcagtgcaaaatgccgaag
aaaaacttcatcaccttgttcaccggcaacgaaaccagcgagacctggttcaacgcggct
atcgcgatgaacaagccgtggtccgaaaaactgcacgatgtgactgaagatgttcagcgc
agcctgcagaagctgcagcagattgaagaagagaccggcctgaccatcgagcaggttaag
gacatcaaccgtcgtatgtctatcggcgaagcgaaagcccgtcgtgcgaagaaagagatg
gtggaagcgaacctgcgtctggttatttctatcgccaagaaatacaccaaccgcggtctg
cagttcctcgacctgattcaggaaggcaacatcggcctgatgaaagcggttgataagttc
gaataccgtcgtggctacaagttctccacctacgcaacctggtggatccgtcaggcgatc
acccgttctatcgcagaccaggcgcgcaccatccgtattccggtgcatatgattgagacc
atcaacaagctcaaccgtatttctcgccagatgctgcaagagatgggccgcgagccgacg
ccggaagaactggccgagcgcatgctgatgccggaagacaaaatccgtaaagtgctgaaa
atcgccaaagagcctatctccatggaaacgccgatcggcgacgatgaagattcgcatctg
ggggatttcatcgaggataccaccctcgagctgccgctggattctgccaccaccgagagc
ctgcgtgcggcaacgcacgacgtgctggcgggccttaccgcccgtgaagcgaaagttctg
cgtatgcgtttcggtatcgacatgaacaccgaccacacgctggaagaagtgggtaaacag
ttcgacgtaacccgcgaacgtatccgtcagatcgaagcgaaggcgctgcgtaaactgcgc
cacccgagccgctctgaagtgctgcgtagcttcctggacgactaa
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