Enterobacter lignolyticus SCF1: Entcl_0908
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Entry
Entcl_0908 CDS
T01342
Name
(GenBank) exodeoxyribonuclease V, gamma subunit
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
esc
Enterobacter lignolyticus SCF1
Pathway
esc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
esc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Entcl_0908
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
esc03400
]
Entcl_0908
Enzymes [BR:
esc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Entcl_0908
DNA repair and recombination proteins [BR:
esc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Entcl_0908
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
ADO47180
UniProt:
E3G531
LinkDB
All DBs
Position
940603..943971
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AA seq
1122 aa
AA seq
DB search
MLRVYHSNRLDVLEALMEFIVERDRLDDPFEPEMVLVQSTGMAQWLQMTLSKRFGIAANI
EFPLPASFIWDMFVRVLPDIPKESAFNKQSMGWKLMTLLPSMLEDEAFTLLRHYLHDDSD
KRKLFQLASRVADLYDQYLVYRPEWLTRWENDERIDGLDAAQAWQAPLWKALVEQTAALG
QPLWHRANLYQRFIAALENSERPPAGLPPRVFICGISALPPVYLQALQALGKHIDVFVLF
TNPCRYYWGDIKDPTFLAKLLARQRRHHRDARELPLFRDPECAAGLFNEDGEQDVGNPML
ASWGKLGRDYIYLLAGLERYEELDAFVDIEPDTLLHNLQYDILELQNSAIAGRTAEEFAR
SDKKRELDPNDRSLTVHLCHSPQREVEVLHDRLLAMLDDDPTLTPRDIIVMVADIDCYSP
FIQAVFGSASGDRYLPYAISDRRARQSHPALQAFITLLSLPDSRFTSEDVLALLDVPVLA
ARFEIDEDGLRYLRQWVNESGVRWGMDDDNVREWDLPATGQHTWRFGLTRMLLGYAMDSQ
QGEWCSVLPYDESSGLIAELVGHLASLLMQLNRWRHALAQARTLAQWLPVCRDMLNDFFL
PDPDTEAALTLIEQQWQAIIEQGVEAHYHDAVPLSLLRDELGQRLDQERISQRFLAGPVN
ICTLMPMRSIPFKVVCLLGMNDGVYPRALSPLGFDLMSQKPVRGDRSRRDDDRYLFLEAL
MSAEQKLYISYIGRSIQDNSERYPSVLVQELVDYIGQSHRLRGDESLNCDDSEQRVKAHI
THQHTRMPFDAANFRSGQEQSFAREWLAAAGQQGEAHGEFIQPLPEQPFDALPLEQLQRF
WLHPVRAFFQMRLRVNFRLEESDIPDMEPFVLEGLTRYQLNQQLVNTLVEQRDAEAMHRR
FRAAGELPYGAFGDISWDEQCREMQALADRVVSLRQPAQSMEIDLQCDGVNITGWLSQVQ
SDGLLRWRPSLVSMSQGMQLWLEHLVYCASGGHGESRLLLRKDEAWRFPPLSVDEAMQHL
SQLVAGYRQGMTQPLLFMPESGGAWLKACFDPENNVILRDDATQQKARGKFMQAWEGNMM
KRGEGDDIWYQRLWRTLEPETYEAITEQTAKYLLPVLRFHQP
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atgttacgggtctaccactccaaccgtctggacgtgctggaagcattaatggagttcatt
gttgagcgggacaggctcgacgacccttttgaacctgagatggtgctggtgcaaagcacc
ggtatggcgcaatggctgcagatgacgctgtcaaagcgcttcggtattgccgctaatatt
gaattcccgctgccggcgagcttcatctgggacatgtttgttcgcgtgctgccggacatc
ccaaaagagagcgcttttaacaaacaaagcatgggctggaagctgatgaccctgctgccg
tcgatgcttgaggacgaggcctttacgctgctgcgccactacctgcacgacgacagcgac
aagcgaaagctgtttcaactggcctcccgcgtggccgatctctacgaccagtacctggtc
tatcgcccggagtggcttacccgctgggaaaacgatgagcgtattgacgggctggatgcg
gctcaggcatggcaggcaccgctgtggaaagcgctggttgaacagaccgcggcgctgggg
cagccgctatggcaccgcgccaatctttatcaacgctttatcgccgcgctggaaaacagc
gagcggccgccagccgggctgccgccgcgtgtgtttatctgcgggatttccgcgctgccg
ccggtctaccttcaggcgctgcaggcgctgggcaaacatattgacgtctttgtgctcttc
accaacccctgtcgctattactggggggatattaaagatcccacattcctggcgaagctg
ctggcgcgccagcgccgccaccatcgcgacgcgcgcgagctgccgctgtttcgcgaccct
gaatgtgcggcgggccttttcaacgaggacggcgagcaggatgtcggcaacccgatgctg
gcctcctggggcaagctggggcgtgactatatctatttgttggccgggctggagcgctat
gaagagctggacgcgtttgtcgatatcgagcccgacaccctgctgcacaatcttcagtac
gatatcctggagctgcaaaacagcgccatcgccgggcgcaccgccgaggagttcgcccgc
agcgacaaaaagcgcgagctcgaccccaacgatcgcagcctgacggtacacctgtgccac
agcccgcagcgggaggtcgaggtgctgcacgacaggctgctcgccatgctggatgacgac
cccacgctgacgccgcgcgatattatcgtgatggtggcggacatcgactgctacagcccc
tttattcaggccgtcttcggcagcgcctcgggcgaccgctacctgccgtatgccatctct
gaccgccgggcgcggcagtcccatccggcgctgcaggcgtttatcacgctgctgtcgtta
cccgatagccgttttaccagtgaggatgtgctggcactgctggatgttcccgtgctggcg
gcgcgttttgagatcgatgaggacggcctgcgctacctgcgccagtgggtgaacgaatcc
ggcgtgcgctggggaatggatgatgacaacgtccgcgaatgggatcttcctgccacggga
cagcatacctggcgctttggtctgacgcgcatgctgctggggtacgcgatggacagccag
cagggcgagtggtgctcggtgctgccctacgatgaatccagcggactgattgccgagctt
gtcgggcatctggcgtcgctattgatgcagcttaaccgctggcgccacgcgctggcccag
gcgcgaacgctggcgcaatggctgccggtgtgccgcgatatgcttaacgatttcttcctg
ccggatccggataccgaagctgcgctgacgcttatcgagcagcagtggcaggcgattatt
gagcagggggttgaggcgcactaccacgacgcggtaccgctctccttgctgcgcgacgag
ctgggacagcgcctcgaccaggagcgtatcagccagcggttcctcgccgggccggtcaat
atttgtaccctgatgccgatgcgctcgatcccgtttaaggtggtttgcctgcttggcatg
aacgacggcgtttatccgcgcgccctgtcgccgctgggctttgatctcatgagtcagaaa
ccggtgcgcggcgatcgcagccgccgcgatgatgaccgctatctgttccttgaagcgctg
atgtccgcagagcagaagctctatatcagctatatcggtcgctcgattcaggacaacagc
gagcgctacccgtcggtactggtgcaggagctggtggattatatcggccagagccaccgc
ctgcgcggcgatgagtcactgaactgtgacgacagcgagcaacgcgtgaaagcgcatatt
acgcaccagcacacccgcatgccgttcgatgccgccaacttccgtagcgggcaggagcaa
agctttgcccgcgagtggctggccgcggcgggccagcagggggaagcccacggcgaattc
attcagcctctgccggagcagccgtttgacgcgctgccgctggagcagctgcagcgtttc
tggctgcacccggtgcgcgccttcttccagatgcgcctgcgggtgaacttccgtctggaa
gagagcgatattcccgatatggagccgttcgtgctggaaggattaacgcgctatcagctg
aaccagcagctggtgaataccctggtggagcagcgcgacgccgaagcgatgcaccgccgt
ttccgggcggcgggcgagctgccctacggcgcctttggcgatatctcctgggatgaacag
tgccgggaaatgcaggcgctggcggaccgcgttgtctccctgcgccagcctgcgcagagt
atggaaattgatttgcaatgtgacggtgtcaacattaccgggtggctgtcgcaggtacag
tcggatggtttgctgcgctggcggccgtcgctcgtcagtatgtcgcagggcatgcagctg
tggcttgagcatctggtctattgcgccagcggcggccacggcgaaagccgcctgctgctg
cgtaaagacgaggcctggcgattcccgccgctgtctgtcgacgaggcgatgcagcatctg
tcgcagctggtcgcgggctacaggcaggggatgacgcagccgctgctatttatgccagaa
agcggcggcgcgtggttaaaagcctgttttgatcctgaaaataatgtcattttaagagat
gacgcgacgcagcaaaaagcgcgcggtaaattcatgcaggcctgggaaggcaacatgatg
aagcgtggcgaaggggacgatatctggtatcagcgcctgtggcgtaccctggagccagag
acgtatgaagcgattaccgagcagacggcaaagtacctgctgccggtgcttcgtttccat
cagccataa
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