Enterobacter lignolyticus SCF1: Entcl_1171
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Entry
Entcl_1171 CDS
T01342
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
esc
Enterobacter lignolyticus SCF1
Brite
KEGG Orthology (KO) [BR:
esc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
esc03009
]
Entcl_1171
Enzymes [BR:
esc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Entcl_1171
Ribosome biogenesis [BR:
esc03009
]
Prokaryotic type
rRNA helicases
Entcl_1171
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
CMS1
Motif
Other DBs
NCBI-ProteinID:
ADO47438
UniProt:
E3G7U7
LinkDB
All DBs
Position
complement(1217362..1218696)
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AA seq
444 aa
AA seq
DB search
MTVTTFSELELDESLLDALQDKGFTRPTAIQAAAIPPALEGRDVLGSAPTGTGKTAAYLL
PALQHLLDFPRKKSGPPRILILTPTRELAMQVADHARELAKHTHLDIATITGGVAYMNHA
EVFSENQDIVVATTGRLLQYIKEENFDCRAVETLILDEADRMLDLGFAQDIEHISGETRW
RKQTMLFSATLEGDAIKDFAERLLEDPVEVSATPSTRERKKIHQWYYRADNFEHKLELLK
HLLKQDDVTRSIVFVRKRERVHEMAELLRAAGINNCYLEGEMAQAKRVEGIKRLTDGRVN
VLIATDVAARGIDIPDVSHVFNFDMPRSGDTYLHRIGRTGRAGRKGTAISLVEAHDHLLL
MKIGRYIEEPLKPRVIDELRPVTRPPSEKMTGKPSKKALAKREEKRKEKEKEKPRVKQRH
RDTKNIGKRRKPSAAKVESSGSEE
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgactgtaacgactttttccgaactcgaactcgacgaaagcctgctggacgccctccag
gataaaggcttcacacgcccaaccgccattcaggctgctgccattccgcctgcgctcgaa
ggccgtgatgtactcggttctgcgccgacaggcaccggtaaaacggcggcatacctgctg
ccagcgttgcagcacctgctcgattttccgcgtaaaaaatccgggccgccgcgcatcctg
attctgacgccgacccgcgagctggcgatgcaggtcgccgatcacgcccgcgagctggcg
aaacatacgcacctcgacatcgcgacgatcaccggcggcgtcgcctatatgaaccacgcc
gaagtgttcagcgaaaaccaggatatcgtagtggcgacgacggggcgtctgctgcagtac
attaaagaagaaaacttcgactgccgcgccgtcgaaacactgatcctggatgaagcggat
cgtatgctggatctgggctttgcccaggatatcgagcacatctccggggagacccgctgg
cgcaaacaaaccatgctgttctccgcaacgctggaaggcgatgcgattaaagatttcgcc
gagcgcctgctggaggatccggtagaggtttccgccacgccgtcgactcgcgagcgcaaa
aaaatccaccagtggtactaccgcgcggataacttcgagcacaagcttgagctgctcaag
cacctgctgaagcaggatgacgtcacccgctccatcgtctttgtgcgcaagcgcgagcgc
gtgcacgaaatggccgaactgctgcgcgcggccgggatcaataactgctatctggaaggc
gagatggcgcaggcaaaacgcgtcgaaggcatcaagcgcctgaccgacggtcgcgtcaat
gtgctgatcgctaccgacgttgcggcccgcggcattgatattcccgacgtcagccacgtc
tttaactttgacatgccgcgcagcggagacacctacctgcaccgtatcggccgtaccggt
cgcgcaggacgtaaaggcacggcgatttcgctggtggaagcgcacgaccatctgctgctg
atgaaaatcggccgctacatcgaagagccgctgaagccccgcgtgatcgacgagttgcgc
ccggtcacccgcccaccgagcgagaaaatgaccggcaaaccgtcgaaaaaagcgctcgct
aaacgcgaagagaagcggaaagaaaaagagaaagaaaaaccgcgcgtgaagcagcgccat
cgcgataccaaaaacattggtaaacgccgcaaaccgagcgccgcgaaggtggagtcatcg
ggttcagaagagtaa
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