Enterobacter lignolyticus SCF1: Entcl_2499
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Entry
Entcl_2499 CDS
T01342
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
esc
Enterobacter lignolyticus SCF1
Brite
KEGG Orthology (KO) [BR:
esc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
esc03016
]
Entcl_2499
Enzymes [BR:
esc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
Entcl_2499
Transfer RNA biogenesis [BR:
esc03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Entcl_2499
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
ODP
PilZ
Motif
Other DBs
NCBI-ProteinID:
ADO48749
UniProt:
E3G9P6
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All DBs
Position
2648687..2650624
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AA seq
645 aa
AA seq
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MFQDNPLLAQLKQQLHSQTPRAEGVVKGTEKGFGFLEVDAQKSYFIPPPQMKKVMHGDRI
IAVIHSEKDKESAEPEELVEPFLTRFVGKVQKKDDRLSIVPDHPLLKDAIPCRPVRELSH
DFKAGDWAVAEMRRHPLKGDRGFYAELTQFITFGDDHFVPWWVTLARHNLEKEAPNGVAT
EMQDEGLERRDLTALDFVTIDSASTEDMDDALYAEETADGKLQLTVAIADPTAWIVEGSK
LDNAAKVRAFTNYLPGFNIPMLPRELSDDLCSLRPNEVRPVLACRMTIAADGAIEDSIDF
FAATIESKAKLAYDDVSDWLDKTGAWQPENERIARQITLLQRICLQRGEWRHHHALVFKD
RPDYRFVLGEKGEVLDIVAEPRRIANRIVEESMIAANICAARVLRDRLGFGIYNVHTGFD
SAKTEQLAELMKTHDVHVDPQEVLTLEGFCKLRRELDAMPTGFLDSRIRRFQSFAEISTE
PGPHFGLGLEAYATWTSPIRKYGDMINHRLLKAIIKGEPANRPQDDVTVQMAERRRLNRM
AERDVADWLYARFLNNKAGTDTRFAAEIIDISRGGMRVRLVDNGAVAFIPAPFLHAVRDE
MVCSQENGTVQIKGETVYKVTDVIDVVIAEVRMETRSIIARPFQA
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaggacaacccgctgcttgcacagctaaaacagcaacttcattcccagactcct
cgcgctgaaggggtcgtaaaaggcactgaaaaaggcttcggctttcttgaagtcgatgcc
cagaaaagctacttcattccgccgccgcaaatgaaaaaagtgatgcacggcgaccgcatt
atcgccgtcattcactctgagaaagataaagaaagcgccgagccggaagagcttgttgaa
cctttcctgacccgtttcgtcggtaaagtgcagaaaaaagacgatcgtctgtctatcgtg
ccggatcatccgctgctgaaagatgcaatcccgtgccgtccggtgcgtgagctgtcccac
gactttaaagcgggcgactgggccgtggccgaaatgcgccgccatccgctgaagggcgac
cgtggcttctacgccgagctgacgcagttcattacctttggcgacgaccacttcgtcccg
tggtgggtcactctggcgcgccacaacctggaaaaagaagcgccgaacggcgttgccacc
gagatgcaggatgaaggccttgagcgccgcgacctgacggcgctcgactttgtgaccatc
gacagcgccagtacggaagatatggacgatgcgctgtacgcggaagagaccgccgacggc
aaactgcagcttaccgtcgccatcgctgacccaacggcgtggattgtcgaaggcagcaag
ctcgacaacgccgccaaagtgcgcgcgttcaccaactacctgccgggctttaacatcccg
atgctgccgcgcgagctgtcggacgacctgtgctctctgcgccccaacgaggtccgcccg
gttctcgcctgccgtatgaccatcgcggccgacggcgcaatcgaagattctatcgacttc
tttgccgcgaccatcgaatcgaaagccaaactggcctacgacgatgtgtccgactggctg
gataaaaccggcgcatggcagccggaaaacgagcgcattgcccgtcaaattaccctgctg
cagcgcatctgcctgcagcgcggcgagtggcgtcaccatcatgcgctggtgttcaaagac
cgcccggactaccgcttcgttctgggtgaaaaaggcgaagtgctggatatcgtcgccgag
ccgcgccgtattgccaaccgcatcgtcgaagagtcaatgattgccgccaacatctgcgcc
gcccgcgtgctgcgcgacaggctcggttttggcatctacaacgtgcataccggcttcgat
tccgccaagaccgaacagctggctgaactgatgaaaacccacgacgtgcacgtcgatccg
caggaggtgctgacgctggaagggttctgtaagctgcgccgcgagctcgacgcaatgccg
acgggcttccttgacagccgcattcgccgcttccagtccttcgcggaaatcagcaccgag
cctggcccgcacttcggcctcggacttgaagcttacgcgacctggacctcgccgattcgt
aaatacggcgacatgatcaaccatcgtctgctgaaagccatcatcaaaggcgagccggcg
aaccgtccgcaggacgacgttaccgtacagatggccgagcgccgtcgtctgaaccgtatg
gccgagcgcgacgttgccgactggctgtacgcccgcttcctgaacaacaaggcaggcacc
gatacccgctttgccgctgagattatcgatatcagccgcggcggtatgcgcgtgcgcctg
gtggataacggcgcagtggcgtttatcccggctccgttcctgcatgccgttcgcgatgaa
atggtgtgcagccaggaaaacggtacggtacagatcaaaggcgaaaccgtttacaaagtg
accgacgtgattgacgtcgttatcgctgaggttcgaatggaaacccgcagtattatcgcg
cgaccgttccaggcctaa
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