Enterobacter lignolyticus SCF1: Entcl_3028
Help
Entry
Entcl_3028 CDS
T01342
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
esc
Enterobacter lignolyticus SCF1
Pathway
esc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
esc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Entcl_3028
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
esc03019
]
Entcl_3028
Enzymes [BR:
esc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Entcl_3028
Messenger RNA biogenesis [BR:
esc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Entcl_3028
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
HI1480
P-loop_SecA
AAA_22
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
ADO49274
UniProt:
E3G307
LinkDB
All DBs
Position
complement(3228107..3229447)
Genome browser
AA seq
446 aa
AA seq
DB search
MSFDTLGLNPEILRAVAEQGYREPTPIQKQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL
QRLVQNEPHAKGRRPIRALILTPTRELAAQVGENVREYSKYLNIRSLVVFGGVSINPQMM
KLRGGVDILVATPGRLLDLEHQNALKLDSVEVLVLDEADRMLDMGFIHDIRRVLAKLPAK
RQNLLFSATFSDDIKALAEKLLRNPLEIEVARRNTASEQVTQHVHFVDKKRKRELLSQMI
GEGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV
ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI
ERLLKKEIPRIAIAGYEPDPSIKAEPIQNGRQSRGGGGGRGQQQPRRNDGGQQPRRSDKP
AGGGEPRKSGENASRRRRPRKPQAAQ
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtttgatacccttggcctgaatcctgaaattctgcgcgccgttgctgagcagggc
taccgcgaacctacccctattcaaaagcaggcgatccctgccgtactggaaggccgtgac
ctgatggccagcgcccagaccggcaccggtaaaaccgcgggctttaccctgcctctgctg
cagcgtctggttcagaacgagccgcatgcgaaaggccgtcgcccgatccgcgcgctgatc
ctcaccccaacccgcgaactggcggcgcaggtgggcgaaaacgtgcgtgagtacagtaaa
tatctcaacatccgctcgctggtggtgtttggcggcgtcagcatcaacccgcagatgatg
aagctgcgcggcggcgtggatattctggtggcgacgccgggccgtctgctggatctggag
catcagaatgccctgaagctcgacagcgtcgaggtcctggtgctggacgaagccgaccgc
atgctggatatgggcttcattcacgatatccgccgcgtgctggcgaagctcccggcgaag
cgtcagaacctgctgttctccgcaaccttctccgacgacatcaaagcgcttgcggaaaaa
ctgctgcgcaacccgctggaaatcgaagttgcgcgccggaataccgcctccgagcaggtg
acgcagcacgttcacttcgtggacaaaaagcgcaagcgggagctgctgtcgcagatgatc
ggcgagggcaactggcagcaggtgctggtgttcacccgcaccaagcacggggccaaccat
ctggcggaacagctgaataaagacggcatccgcagcgccgccatccacggcaacaagagc
cagggagcgcgtacccgcgcgctggccgattttaaatccggcgatatccgcgtgctggtc
gccaccgacattgccgcgcgcggtctggatattgaagagctgccgcacgtggtgaactac
gagctgccgaacgtgccggaagactacgtgcaccgtatcggccgtaccggccgcgcggcg
gcgaccggcgaagcgctgtcgctggtgtgcgtcgatgagcacaagctgctgcgcgatatc
gaacgcctgctgaaaaaagagatcccgcgtatcgccattgcgggctatgagccggacccg
agcatcaaggccgagccgattcagaacggtcgccagagccgcggcggcggcggcggtcgc
gggcagcagcagccgcgtcgtaacgacggtggtcagcagccgcgccgtagcgataaaccg
gcaggcggcggcgagccgcgcaaatccggggaaaacgcgtcgcgccgtcgtcgtccccgc
aagccgcaggcagcccagtaa
DBGET
integrated database retrieval system
