Enterobacter lignolyticus SCF1: Entcl_3422
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Entry
Entcl_3422 CDS
T01342
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
esc
Enterobacter lignolyticus SCF1
Brite
KEGG Orthology (KO) [BR:
esc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
esc03400
]
Entcl_3422
DNA repair and recombination proteins [BR:
esc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Entcl_3422
Archaeal homologous recombinant proteins
Entcl_3422
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
cobW
Mt_ATP-synt_D
ABC_tran
AAA_15
nSTAND3
AAA_21
ABC_ATPase
NTPase_1
AAA_22
AAA_14
Motif
Other DBs
NCBI-ProteinID:
ADO49667
UniProt:
E3G7G7
LinkDB
All DBs
Position
3651419..3654559
Genome browser
AA seq
1046 aa
AA seq
DB search
MKILSLRLKNLNSLKGEWKIDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR
LNTVSQSQNDLMTRDTAECLAEVEFEVKGIAYRAFWSQNRARNQPDGNLQAPRVELATCA
DGKILADKVKDKLELTASLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE
IYGQISAQVFEKHKTAKTELEKLQAQASGMVLLNDEQQQALQQRLQALTDEEKRLQDVQT
RTQSWAQWLTRENEICREQQRAQAALQSAGQALNDAEPQLAKLALAHPADTLRPLWMRLQ
DRQAALQHIRQQTTEVNTRLQSQTGLRNRIRHSAARQHTQLLAQQKTLGDWLAAHDGYRH
WQRELAGWRATFEQLARDAVQLQMLSQREAGLRGELSALPETALTLEAAATAAALEQHAV
LRPYRQQLNALYGRFAPLQKRRQQLQQSLQQRQQEQEQHDAELARRRQQYKEKLQQFTDV
KTLCEQERTIVALQEERARLQAGSPCPLCGSTEHPAIERYQALTPGVNEARRDALDKEVK
ELAESGAALRGQLEALNKQQQADNGEIQTLTEQEQALTLQWQSTVAALGIALTPQEDVAA
WLETQQEYEQQLFRHSQRLALQRQMDALNAQAAEIRQQQAQRQQALAATLAALALTSPEA
GEERRWLDAREAESAQWQTHSDEQQRNQRQLELLQPLLDTLPESADPEAPEETPLEGWQQ
VHHDCVSLHGQWQTLQQQETDASERLQQAQQAFEQALAASQFANQQAFLDALLDEATRSR
LEQLRQTLENQLHQQQALVAQAQATREQHQQLKPDGLPETESLETLQAQLQQLAQQMREN
STQQGGIRQQLTQDAASRQQQQALMQEIDAAARTLEDWGWLNALIGSREGDKFRKFAQGL
TLDNLVWLANEQLSRLHGRYLLQRKASEALELEVVDTWQADAVRDTRTLSGGESFLVSLA
LALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKVIGVISHVEAMKE
RIPVQIRVKKINGLGYSRLDKRFAME
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcctgagcctgcgcctgaagaacctcaactccctgaagggcgagtggaaaatt
gactttaccgccgaaccgttcgccagcaacggtttgttcgccattaccgggccgacgggc
gcggggaaaaccaccctgctcgacgccatttgcctggccctgtatcacgagacgccgcgg
cttaacacggtgtcgcaatcgcaaaacgacctgatgacccgtgataccgccgaatgcctg
gcggaagtagagtttgaggtcaaaggcatcgcataccgcgccttctggagccagaaccgg
gcgcgcaaccagccggacggcaacctgcaggcgccgcgcgttgagctggcgacctgcgcg
gacggcaaaattctggccgacaaggtgaaggacaagctggagctgaccgcctcgctcacc
gggctggactacgggcgctttacccgctcgatgctgctttcccaggggcagttcgccgcc
ttcctcaacgccaaacccaaagagcgggccgagctgctcgaagagctgaccggcaccgag
atttacgggcagatctcggcgcaggtgtttgaaaagcataaaaccgcaaaaaccgagctg
gaaaagctgcaggcgcaggcctcggggatggtgctgctgaacgatgagcagcagcaggcg
ctgcagcaacgtttgcaggcgcttactgacgaagagaaacggctgcaggacgtacagacc
cgcacccaaagctgggcgcagtggctgacgagggaaaacgaaatttgccgcgagcagcag
cgcgcgcaggccgcgctgcagagcgccggacaggcgctgaacgacgccgaaccgcagctg
gcgaagctggcgctggcgcatcctgccgatacgctgcgcccgctgtggatgcggctgcag
gaccggcaggccgcgctgcagcatatccgccagcaaacgactgaagtaaatactcgctta
cagagccagaccgggctgcgaaaccgcatccgccacagcgccgcccggcagcacacgcag
ctgctggcgcagcagaaaaccctcggcgactggctcgccgcccacgacggctatcgtcac
tggcagcgggagcttgccggatggcgggccacgtttgaacagctggcgcgggacgccgtg
cagctgcagatgctgtcccagcgcgaggccgggctcaggggcgaactcagcgcgctgccg
gaaaccgcgctgaccctggaggcggcggcgacggcagcggcgctggagcagcacgccgtc
ctgcgcccataccgccagcagctcaacgcgctgtacggacgctttgcgccgctgcaaaag
cgccgtcagcagctgcaacagtcgctgcagcagcgccagcaggagcaagaacagcacgat
gccgaactcgcccgccgccgccagcagtataaggagaagctccagcagttcaccgacgtc
aaaacgctgtgcgagcaggagcgcaccatcgtggcgctgcaggaagagcgcgcccgcctg
caggcgggttccccgtgcccgctgtgcggctcaaccgagcatccggccattgagcgctac
caggcgctgacgccgggcgtgaatgaagcccgccgggacgcgctggataaagaggtcaag
gagcttgccgagtccggcgccgcgctgcgcggccagctggaggcgctcaataagcagcag
caggccgacaacggcgagatacagacgctgacggagcaggagcaagcgctcaccttacag
tggcaatccaccgtcgccgcgctggggatcgccctgacgccgcaggaggatgtcgccgcc
tggctggaaacacagcaggagtacgagcagcagcttttccgtcacagccagcggctcgcc
ctgcagcgccagatggacgccctgaatgcccaggcggcggaaatccgccagcagcaggcg
cagcgccagcaggcgctggcggccacgcttgccgcgctggcgctgacgtcgccggaggcg
ggcgaagagcgtcgctggctggacgcgcgcgaggcggaaagcgcgcagtggcagacccac
agcgacgaacagcagcgcaaccagcgccagcttgagctgctgcagccgctgctcgacacg
ctgccggaaagcgcagaccccgaagcgcccgaggagacgccgctggagggatggcagcag
gtgcatcatgactgcgtctcgctccacggccagtggcaaacgctgcagcagcaggaaacc
gacgccagcgagcgcctgcagcaggcgcagcaggcctttgagcaggcgctggcggcaagc
cagttcgccaaccagcaggcgttcctcgacgcgctgctcgacgaagcgacccgcagccgt
ctggagcagctccgacaaacgctggaaaaccagctgcaccagcagcaggcgctggtcgcc
caggcgcaggcgacgcgggagcagcatcagcagctgaagcccgacggtctcccggagacc
gagagcctcgagacgctgcaggctcagctgcagcagctggcccagcagatgcgcgagaac
agcacgcagcagggcggtattcgccagcagctgacgcaggatgccgccagccgccagcag
cagcaagcgctgatgcaggagatagacgcagccgcaagaacgctggaggactggggctgg
ctcaacgcgctgatcggctccagagagggtgataaattccgtaaattcgcccaggggctg
actctcgataacctggtgtggctggcgaatgagcagctcagccgcctgcacggccgctac
ctgctgcagcgcaaggccagcgaagcgctggagctggaggtcgtcgatacctggcaggcc
gacgcggttcgcgatacccgcaccctgtccggcggcgaaagcttcctcgtcagcctcgcg
ctggcgctggcgctgtcggatctggtcagccacaaaacgcggatcgactcgctgttcctc
gacgaaggctttggcacgctggacagcgaaacgctggataccgcgctggatgcgctggat
gccctcaacgccagcggtaaggtcatcggcgttatcagccacgttgaagcgatgaaagag
cggattccggtgcaaatcagggtgaagaaaatcaacgggctgggatatagcaggctggat
aagcgctttgcgatggagtga
DBGET
integrated database retrieval system
