Enterobacter lignolyticus SCF1: Entcl_3810
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Entry
Entcl_3810 CDS
T01342
Name
(GenBank) Sigma 54 interacting domain protein
KO
K17473
sigma-54 dependent transcriptional regulator, dga operon transcriptional activator
Organism
esc
Enterobacter lignolyticus SCF1
Brite
KEGG Orthology (KO) [BR:
esc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
esc03000
]
Entcl_3810
Transcription factors [BR:
esc03000
]
Prokaryotic type
Helix-turn-helix
Other families
Entcl_3810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PRD
Sigma54_activ_2
AAA_5
AAA_22
AAA
AAA_16
EIIA-man
NACHT
AAA_14
HTH_Crp_2
Mg_chelatase
AAA_2
IstB_IS21
AAA_25
nSTAND3
AAA_7
AAA_24
RNA_helicase
Motif
Other DBs
NCBI-ProteinID:
ADO50050
UniProt:
E3GBK8
LinkDB
All DBs
Position
4101176..4103998
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AA seq
940 aa
AA seq
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MTATHSGNTMRRIEIVLRELERLTRGLSLSDLQQEVAFTAESIGFNLGLARNSVSKDLNQ
LCNDGLAIKGRGRPVFFLHRLALEALLGRPLLDAEREVHSAAALLPHPPEQEDDPFALLI
GHDRSLRDAVEKGKAAVLYPHGLHVLLTGPSGVGKTFFAELMHRYACEHAAGTPPPLVYF
NCAEYAHNPELLSSHLFGHRQGAFTGATSDKRGLVEQADGGYLLLDEVHRLPYEGQEKLF
SLLDKGEYRPLGEAAGARKIAVRLICATTEPVSSSLLRTFQRRIQVSIDLPGIRARSVEE
QIELIVGFLQRESRKIERTISIDKTLLLWLLNKPLEGNIGQLKSDIQFLCAQAWASGMTA
RSEVLLLDKKLVDAPFNATAEQRLLVDTLFNSRPLLSVDARTLPQVKNSLASGSDLPESD
LFYSFLTREYVNLRNSNVPPAETLAILKNKLSSIFEYGLYRRDTHANPPRYGDPIEERVT
MLISCVEQVLGFGLPENLVSPLRKHFLALPGYVQRGLIPQLYSSSLILDRCKDEYDNATL
LCRKINELLHIQCPATEVVWLCLFLKECRHYRQRISTSPECGVLLIAHGATTATSMAQYV
NRVLERDLFSAIDMPFEQSVHDTLEKLTLAIRERGWQRLILMVDIGSLVHFGSTVSKLFQ
IDVLLMPNITLTSLLEVGLDLNYETSDLPALAGMMRDKGIPCQLCTPQQESIGKVLIISC
ITGMGTAEKIKKVLEESFGELMAQDTRMLILDYNEVRSPERIQQSLNAHERVAGIVGTFQ
PGLPDIPFISLEELFSEQGPELVLSLLTPDLSSAERRLEMERSAARFISALTMESIINHI
SVLNPQRILTEMEGVLGHLRAALAITPSRQVTLRFLIHCCCMVERIVINRKPLQMALEMK
PEMDLRAFSVIKSAFQPVEEAYAIRLSDAEYVYIYELLFG
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atgacagcaacccatagcggtaacacgatgagacgtatagaaatagttcttcgggaactg
gaacgactcacacgaggattaagcctgagcgacctgcagcaggaggttgcgtttaccgcc
gaaagcatcggctttaaccttgggctggcgcgcaactcggtcagcaaagacctgaaccag
ctgtgcaatgacgggctggcgatcaaaggccgcgggcggccggtcttctttttgcaccga
ctggcgctggaggcgctgctcggcaggccgctgctcgacgccgagcgcgaggtgcactcc
gccgccgcgctgctgccgcatccgccggagcaggaggacgaccctttcgccttgcttatc
ggccacgatcgcagcctgcgcgacgccgtagaaaaaggcaaagcggcggtgctttacccg
catgggttgcacgtgctgctcaccggcccctccggcgtcggcaaaacctttttcgccgaa
ctgatgcaccgctacgcctgcgagcatgccgcgggcaccccgccgccgctggtctacttc
aactgcgccgaatacgcccacaacccggagctgctctcctcgcacctgttcggccatcgt
cagggggcgtttaccggcgctaccagcgacaagcgcgggctggtcgaacaggcggacggc
ggctacctgctgctggatgaggttcaccgactgccctatgaggggcaggaaaagctcttt
tcgctgctcgacaagggtgaataccgcccgcttggcgaagcggcaggcgcacgcaaaatc
gccgtacggcttatctgcgccaccaccgaaccggtgagctcctcgctgctgcgcaccttc
cagcgccgcatccaggtcagcattgatttacccggcatccgcgcccgctcggtggaagaa
cagatagaacttatcgtcggttttttacagcgggaaagccgcaagatagaacgcaccatc
agcattgataaaacgctgctgctctggctgctgaacaaaccgctggaaggcaatatcggc
cagctcaaaagcgatattcagtttctctgcgctcaggcgtgggcctcggggatgacggcc
cgcagcgaggtgctgctgctcgataaaaagctggtggatgccccgtttaacgccaccgca
gagcagcgcctgctggtggatacgctctttaacagccgcccgctgctcagcgttgacgcc
cgcacgttgccgcaggtgaagaactcactcgccagcggtagcgacctgccggaaagcgac
ctgttttacagcttcctgacccgggaatacgtcaacctgcgcaacagcaacgtcccgccc
gccgagacgctggcgatcctcaaaaacaagctcagctccatcttcgaatacgggctgtat
cgccgggatacgcacgctaacccgccgcgctatggcgaccccatagaagagcgcgtcacc
atgcttatcagctgcgtggagcaggtgctgggctttgggttgccggaaaacctcgtcagc
ccgctgcgtaaacactttctggcgctgccggggtatgtgcagcgggggctgatcccccag
ctttactcctcaagcctgatcctcgatcgctgtaaagacgagtacgacaacgccacgctg
ctgtgccgcaaaatcaacgagctgctgcatattcagtgcccggcgacagaagtggtctgg
ctgtgcctgttcctcaaggagtgccgtcactatcgccagcgcatcagtaccagcccggag
tgcggcgtgctgctgatcgcccatggcgcgacaaccgccaccagcatggcgcaatacgtc
aaccgcgtgctggagcgcgatctgttcagcgccatcgatatgccgtttgagcagtcggtc
cacgacacgctggaaaagctgaccctggctatccgcgagcgcggctggcagcggctgatc
ctgatggtggatatcggctcgctggtgcatttcggcagcacggtgagcaaactgttccag
atagacgtgctgctgatgcccaacatcacgctgaccagtctgctggaagtcgggctcgat
ctgaactacgaaaccagcgatctgcctgcgctggccgggatgatgcgcgacaaaggcatt
ccctgccagctgtgcacgccgcagcaggagagcattggcaaggtgctgattatctcctgc
atcaccggcatgggcacagcggagaaaatcaaaaaagtgctggaggagagctttggcgag
ctgatggcgcaggatacgcggatgctgatcctggactacaacgaggtgcgcagccccgaa
cgcattcagcagtcgctcaacgcccatgaacgggtggcaggtatcgtcggcaccttccag
ccgggcctgccggatattccgtttatttcgctggaggagctgttctccgagcaggggccg
gagctggtgttaagcctgctgacgccggatctgtccagcgccgaacgccgtcttgagatg
gagcgcagcgcggcgcggtttatcagcgccctgaccatggaaagcatcatcaaccacatt
tcggtgctcaacccgcagcgtattctgacggaaatggagggcgtgctggggcacctgcgc
gccgcgcttgccattacgccgagccgccaggtgacactgcgcttcctgatccactgctgc
tgtatggtcgagcgtatcgtgattaaccgtaaaccgttacagatggcgctggaaatgaag
ccggagatggacctgcgggcgtttagtgtcatcaaatccgcatttcagccggtcgaggag
gcttatgccatccgcctttccgatgcggaatacgtttatatttacgagctgctgttcggc
taa
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