Enterobacter lignolyticus SCF1: Entcl_4215
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Entry
Entcl_4215 CDS
T01342
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
esc
Enterobacter lignolyticus SCF1
Pathway
esc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
esc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Entcl_4215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
esc03019
]
Entcl_4215
03400 DNA repair and recombination proteins [BR:
esc03400
]
Entcl_4215
Enzymes [BR:
esc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Entcl_4215
Messenger RNA biogenesis [BR:
esc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Entcl_4215
DNA repair and recombination proteins [BR:
esc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Entcl_4215
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
ADO50448
UniProt:
E3G3W6
LinkDB
All DBs
Position
complement(4555551..4557380)
Genome browser
AA seq
609 aa
AA seq
DB search
MAQAEVLNQTSLAKQVLQETFGYQQFRPGQETIIETVLEGRDCLVVMPTGGGKSLCYQIP
ALVLNGLTVVVSPLISLMKDQVDQLLANGVAAACLNSTQNREQQLEVMAGCRTGKIRLLY
IAPERLMLDNFLEHLAHWNPVMLAVDEAHCISQWGHDFRPEYAALGQLRQRFPAVPFMAL
TATADDTTRLDIVRLLGLNDPLIQLSSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGI
IYCNSRSKVEDTAARLQSRGYSAAAYHAGLENGVRADVQEKFQRDDLQIVVATVAFGMGI
NKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKPAGQL
QDIERHKLNAMGAFAEAQTCRRLVLLNYFGEGRQESCGNCDICLDPPRQYDGLEDARKAL
STIYRVNQRFGMGYVVEVLRGANSQRIRELGHDKLPVYGIGREQSHEHWVSVIRQLIHLG
FATQNIAHHSALQLTEAARPILRAEVPLQLAVPRIVALKPRVAQKSYGGNYDRKLFAKLR
KLRKVIADEENIPPYVVFNDATLIEMAEQMPVSPSDMLSVNGVGMRKLERFGREFMALIR
AHLDGDDEE
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
gtggcgcaggcggaagtactcaatcagacatcgctggcgaagcaggttttgcaggaaacc
tttggctaccagcagttccgtccgggtcaggaaaccatcattgaaaccgtgctggaaggc
cgcgactgcctggtcgttatgcctaccggcggcggtaaatcgctgtgttatcaaattccc
gcgctggtgctcaacggcctgacggttgtcgtatcgccgctcatttctctgatgaaagac
caggtcgatcagctgcttgccaatggcgtggccgcggcgtgtctgaactcaacgcagaac
cgcgaacagcagcttgaggtaatggcgggctgccgtaccggcaaaatccgcctgctgtat
atcgcgccggaacgcctgatgctggataacttcctcgagcatctggcgcactggaacccg
gtgatgctggcggtcgacgaggcgcactgtatttcccagtgggggcatgatttccgtccg
gaatatgccgcgctgggccagctgcgtcagcgtttccctgcggtgccgtttatggcgctg
accgctacggcggatgacactacgcgcctcgatatcgttcgcctgctggggctgaacgac
ccgcttatccagctcagcagttttgaccgccctaacatccgctacatgctgatggaaaag
tttaaaccgctcgatcagctgatgcgctacgtccaggagcagcgcggcaagtccggcatt
atttactgcaacagccgctcaaaagtggaagataccgccgcccgcctgcaaagtcgcggc
tatagcgcggcggcctatcacgccgggctggaaaacggcgtccgcgccgatgtgcaggag
aagttccagcgcgacgacctgcaaatcgtggtagcgaccgtggcgttcggtatggggatc
aacaaacccaacgtgcgcttcgtggtgcattttgatataccccgcaatatcgaatcctac
taccaggagaccgggcgcgccgggcgcgacgggctgcccgctgaagcgatgctgttttac
gatccggccgatatggcgtggctcaggcgctgcctggaggaaaagccggccgggcagttg
caggatatcgaacgccataagcttaacgcgatgggcgcgtttgccgaggcgcagacctgc
cgccgtctggtgctgctgaactactttggcgaagggcgccaggaatcctgcggcaactgc
gatatttgcctcgacccgccgcgccagtacgacgggctggaggatgcgcgcaaggcgctg
tcgaccatttaccgcgtcaaccagcgcttcggcatgggctatgtggtggaggtgctgcgc
ggcgcgaacagccagcgtatccgcgagctggggcatgacaagctgccggtgtacggtatt
ggccgcgagcagagtcatgagcactgggtcagcgtgatccgccaactgattcacctcggc
ttcgccacccagaatatcgcccatcattcggcgctacagctgaccgaggcggcgcgcccg
atactgcgcgccgaggtgccgctgcagctggcggtgccgcgtatcgtcgccctgaagccg
cgggtggcgcaaaaatcctacggcggcaactacgatcgtaagctgttcgccaaactgcgc
aagctgcgtaaagtcatcgccgacgaagagaatattccgccttacgtggtctttaacgac
gccacgcttatcgaaatggccgagcagatgccggtcagccccagcgacatgctgagcgtc
aacggcgtcgggatgcgcaaactcgagcgttttggtcgggaattcatggccttgatccgc
gcccacctcgacggagacgatgaggagtag
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