Enterobacter lignolyticus SCF1: Entcl_4222
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Entry
Entcl_4222 CDS
T01342
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
esc
Enterobacter lignolyticus SCF1
Pathway
esc03420
Nucleotide excision repair
esc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
esc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Entcl_4222
03430 Mismatch repair
Entcl_4222
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
esc03400
]
Entcl_4222
Enzymes [BR:
esc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Entcl_4222
DNA repair and recombination proteins [BR:
esc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Entcl_4222
MMR (mismatch excision repair)
Other MMR factors
Entcl_4222
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ADO50455
UniProt:
E3G3X3
LinkDB
All DBs
Position
complement(4563120..4565318)
Genome browser
AA seq
732 aa
AA seq
DB search
MRQRAAHFSAVPMDVSYLLDSLNDKQREAVAAPRTNMLVLAGAGSGKTRVLVHRIAWLLS
VENSSPYSIMAVTFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHLDANLP
QDFQILDSEDQLRLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQ
TWQKVYQAYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNI
QYAWIRLLAGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSN
ILSAANALIENNNGRLGKKLWTDGVDGEPISLYCAFNELDEARFVVNRIKTWQDNGGALE
QCAILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFE
RVVNTPTRGIGDRTLDIVRQTSRDRQLTLWQSCRELLKEKALAGRAASALQRFMELVDAL
AQETADMPLHVQTDRVIKDSGLWMMYEQEKGEKGQTRIENLEELVTATRQFSYNDEDEDL
MPLQAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDE
GGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEACVEEVRLRA
TVSRPVSHQRMGTPMAENDTGYKLGQRVRHPKFGEGTIVNLEGSGEHSRLQVAFQGQGIK
WLVAAYARLENA
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgcgccagcgggcagcgcatttttcggcggtgccaatggacgtttcttacctgctcgac
agcctcaatgacaaacagcgtgaagccgtggcggcgccgcgtaccaatatgctggtgctg
gcaggcgcgggcagcggtaagacgcgcgttctggtgcaccgtatcgcctggctgctgagc
gtggaaaacagctcgccgtactccatcatggcggtgacctttaccaataaagcggcggcc
gaaatgcgtcaccgtattggtcaactgatgggcacatcgcagggcggtatgtgggttggc
acctttcacgggctggcgcaccgcctgctgcgcgcgcaccatctggacgctaacctgccg
caggattttcagatcctcgacagcgaagatcagctgcgtctgctaaagcgcctgattaag
gcgatgaatctcgatgagaagcagtggccgccgcgccaggcgatgtggtacatcaacagc
cagaaagacgaggggctgcgtccgcaccacattcagagctacggcaaccccgtcgagcag
acctggcagaaagtctaccaggcctatcaggaggcctgcgatcgcgccgggctggtggat
ttcgccgagctgctgctgcgcgctcacgagctgtggcttaacaagccgcacatcctccag
cactaccgcgagcgctttaccaacatcctggtcgacgaatttcaggataccaacaacatt
cagtacgcgtggatccgcctgctggcaggcgataccggcaaggtcatgatcgtcggcgac
gatgaccagtctatttacggctggcgcggcgcgcaggtggagaatatccagcgtttcctc
aacgatttccccggggcggaaaccatccgccttgagcagaactaccgttcgaccagcaat
attctgagcgcggcgaacgcccttatcgaaaacaacaacgggcgcctgggcaagaagctg
tggaccgacggcgtcgacggcgaaccgatttcgctgtactgcgcgttcaacgagctcgac
gaagcgcggttcgtggtgaaccgcatcaaaacctggcaggacaacggcggcgcgcttgag
cagtgcgccattctgtatcgcagcaacgcccagtcgcgcgtgctggaagaggcgctgctg
caggccagcatgccgtaccgtatctacggcggcatgcgcttcttcgaacgccaggaaatt
aaggacgccctctcttacctgcgtcttatcgccaaccgtaacgacgatgcggcgtttgag
cgggtagtcaacaccccgacgcgcggcatcggcgaccgcacgctggacatcgtgcgccag
acctcccgcgatcgccagctgacgctgtggcagtcctgccgcgagctgctgaaagaaaaa
gcgctggcgggacgcgcggccagcgctctgcagcgctttatggagctggtcgacgcgctg
gcgcaggagaccgccgatatgccgctgcacgtgcagaccgaccgggtgataaaagactcc
gggttgtggatgatgtacgagcaggagaaaggcgagaagggccagacgcggatcgaaaac
ttagaggaactggtaacggcgacgcgccagttcagctacaacgatgaagacgaagatctg
atgccgctgcaggcgttcttgtcgcatgcggcgctggaagccggggaagggcaggcggat
acctggcaggacgcggtacagctgatgaccctgcactcggcaaaagggctggagttcccg
caggtgtttatcgtcggcatggaagaggggatgttccccagccagatgtcgctggatgaa
ggcgggcggctggaagaggagcgccgcctggcctacgtcggcgtgacccgggcgatgcaa
aagctgaccctgacctacgcggaaacccgtcgcctgtacggcaaagaggtgtatcaccgg
ccgtcgcgctttatcggcgagctgccggaggcctgcgttgaagaggtgcgcctgcgggcg
acggtcagccgcccggtcagccatcagcgtatgggcacccccatggcggaaaacgacacc
ggctataagctcggccagcgcgtgcgccatccgaaatttggcgaaggcaccatcgtcaac
ctggagggaagcggtgaacacagccggctgcaggtggcgtttcaggggcagggaattaaa
tggctggttgcggcgtacgcccggctggaaaatgcgtaa
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