Candidatus Electrothrix scaldis: SD837_01335
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Entry
SD837_01335 CDS
T11025
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
esd Candidatus Electrothrix scaldis
Pathway
esd00470
D-Amino acid metabolism
esd00550
Peptidoglycan biosynthesis
esd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
esd00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SD837_01335 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SD837_01335 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
esd01011
]
SD837_01335 (murD)
Enzymes [BR:
esd01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
SD837_01335 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
esd01011
]
Precursor biosynthesis
Amino acid ligase
SD837_01335 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
MurD_N
Thi4
DUF7464
CbiA
Motif
Other DBs
NCBI-ProteinID:
WPD23209
LinkDB
All DBs
Position
complement(291845..293227)
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AA seq
460 aa
AA seq
DB search
MIELKAGMKSVVVGLGKSGLAAVRYLHQQGLEVMVSEFREQIPEEERAMLEQCNVDPGTG
LETGGHTAAFFADADLIVPSPGVPADLPILTAARTRGVPVLGELALAAGRIQVPVIAVTG
SNGKTTVTSLIGHLLRTCGKKVFVGGNIGTPILEYLLEPGDAEVVVLELSSFQLEAAGDF
RPNIGLLLNLSPDHIDRHGSFEEYVAAKMQLFACQGRGDTAIIGTDDVLLAAAPPTAGEK
LYSFGTQPGCRARVKGTVVHLEPEFSSEGEGELYELAETRLHSRVNLYNAAAAILAIRAF
GCNEQDIKAGLTDFQPPQHRMTPVGEINGVRFVNDSKATNVGAVVAALAGFGMGAEKEVI
LIAGGRNKGGDFDALVPVFRQHVKHVVLIGESAPDLAAVVEEAGVGYQFARHMEEAVAKA
FAAASRGDTVLLAPACASFDMFRSYEQRGEEFGRCVQLLA
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgattgaattaaaggcgggcatgaagtccgtagtggttggtctggggaaatccgggttg
gcagcagtacgctatctgcaccagcaggggctggaggttatggtttctgagtttcgggag
cagatcccggaggaagagcgggctatgctggagcaatgcaatgtagatccaggcacaggg
ctggagacaggaggccatacagctgccttttttgctgatgcggatctgatcgtgcccagt
cctggggtgcctgcagatttgccgatcttaacagcggcccggacgcggggcgtgccggta
cttggagaactggccttggctgccggacgtatccaggtgccggtgattgccgtgaccggg
tccaacggcaagaccaccgtgaccagcctgattggtcatctcttgcggacttgcggcaaa
aaggtctttgtgggcggtaatatcggcaccccgatcctggagtaccttctggagccggga
gacgctgaggtcgtggtgctggagttgtccagttttcagctggaagcggctggcgatttt
cggcctaatatcggtctgctccttaatctttccccggatcatattgaccgccacggcagt
tttgaggagtacgttgccgcgaagatgcagctctttgcctgtcaaggcaggggcgataca
gcgattattggcacggacgatgtgctgcttgcggcagcaccacccacggctggtgagaaa
ttatatagctttggtacccagcccggttgtcgcgcaagggtgaagggaaccgtcgttcac
ctagagcccgaatttagttcggaaggtgagggcgagttgtacgagcttgcagagacgcgg
ctgcattccagggtgaatctgtacaatgccgctgcagctatccttgcaatacgggccttt
ggctgcaacgagcaggatattaaggccggactgaccgattttcaaccgccccagcatagg
atgactcctgtaggtgagataaacggcgttcgttttgttaacgattctaaggcgaccaat
gtgggggccgtggttgcggccttagcaggctttgggatgggtgctgaaaaagaggtcatc
ctgattgccgggggaaggaataaagggggcgattttgatgccttggtgccggtatttcgt
cagcatgtcaaacacgtcgtgctgatcggtgagtctgcgccggatttagccgccgttgtt
gaggaagccggtgtcgggtatcaatttgcccgacatatggaagaggcggttgcaaaggcc
tttgccgctgcaagtcgaggcgatacggtgctgctggctccggcctgcgccagttttgat
atgttcaggagttatgagcagcggggggaggagtttgggcggtgtgtgcagttgcttgca
taa
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