Candidatus Electrothrix scaldis: SD837_01565
Help
Entry
SD837_01565 CDS
T11025
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
esd Candidatus Electrothrix scaldis
Pathway
esd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
esd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SD837_01565 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
esd03019
]
SD837_01565 (groL)
03110 Chaperones and folding catalysts [BR:
esd03110
]
SD837_01565 (groL)
03029 Mitochondrial biogenesis [BR:
esd03029
]
SD837_01565 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
esd04147
]
SD837_01565 (groL)
Enzymes [BR:
esd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
SD837_01565 (groL)
Messenger RNA biogenesis [BR:
esd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
SD837_01565 (groL)
Chaperones and folding catalysts [BR:
esd03110
]
Heat shock proteins
HSP60 / Chaperonin
SD837_01565 (groL)
Mitochondrial biogenesis [BR:
esd03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
SD837_01565 (groL)
Exosome [BR:
esd04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SD837_01565 (groL)
Exosomal proteins of other body fluids (saliva and urine)
SD837_01565 (groL)
Exosomal proteins of breast cancer cells
SD837_01565 (groL)
Exosomal proteins of colorectal cancer cells
SD837_01565 (groL)
Exosomal proteins of bladder cancer cells
SD837_01565 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
WPD23254
LinkDB
All DBs
Position
complement(351935..353599)
Genome browser
AA seq
554 aa
AA seq
DB search
MSKELYYSGKAREAMLAGVNCLADAVKVTLGPKGRNVLIEKSFGAPVITKDGVTVAKEIE
IKDKFKNMGAQMVKEVASKTSDVAGDGTTTATVLAQAIYREGAKMVAAGSNPMEIKRGID
ASVATVVAELSTISQPTKEQSEIAQVGTISANNDTTIGSIIAEAMDKVGKEGVITVEEAK
SMETSLDVVEGMQFDRGYLSPYFVTDPDRMEVNMEDPLILINEKKISNMKDLLPILEAVA
KMGKPLFIIAEDVDGEALATLVVNKLRGTLNIAAVKAPGFGDRRKAMLEDIAILTGGQVI
TEDLGIKLENITVNDLGTAKRIVVDKDNTTVIDGAGDKDKLAARVKQIRTQAEDSTSDYD
REKLQERLAKLIGGVAVINVGAATEIEMKEKKARVEDALNATRAAVEEGVVPGGGVAFLR
CIKALESLKLVGEQDLGRQIIMRALEEPVRQIAANAGMEGSVVVEKVKGMEGANGFNAAL
EEYGDLIAAGVIDPTKVSRTALQNAASVSGMLLTTECMIADEPDKDDAGAGAAMGGMPGG
MGGMGGMGGMGGMM
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaagaattatattacagcggcaaagcccgcgaggcaatgcttgccggtgtaaat
tgcttggctgatgcagtaaaggttaccctcggacctaaggggcgcaatgttctgattgag
aaatctttcggcgcgccggttatcaccaaagacggtgtgactgttgccaaagagattgag
atcaaagataagtttaaaaacatgggcgctcagatggtcaaagaggttgcttccaagacc
tctgatgttgctggcgacggaaccaccaccgcaactgttctggcccaggccatctaccgc
gaaggtgccaagatggttgctgctggctccaatcctatggagatcaaacgcggtatcgat
gcttctgttgcaacggttgttgccgagctgtccacgatttctcaacccaccaaagagcag
agcgagattgctcaggttggtaccatttccgccaacaacgacaccaccatcggcagcatc
attgctgaggcaatggataaagtaggcaaggaaggggttatcaccgtggaagaggcaaag
tccatggagacctctctggacgttgttgaaggtatgcagtttgatcgcggctatctttct
ccgtattttgtgacagatccggatcgtatggaagtcaacatggaagatccgctgatcctg
atcaacgagaaaaagatctccaatatgaaggacctgctgcctatccttgaggctgttgct
aaaatgggtaagccgctgttcattattgctgaagatgttgatggcgaagcactggcaacc
ttggttgtcaataagctgcgcggtaccctgaacatcgctgctgtaaaggctccgggcttt
ggtgatcgtcgtaaggctatgctggaagatatcgctatcctcaccggtggtcaggttatc
accgaggatctggggatcaagctggagaacattactgttaatgatctcggaacagctaag
cgtattgttgttgataaagacaataccactgttatcgacggtgctggtgacaaggataaa
ctggctgcccgcgttaaacaaatccgcacccaggccgaggattccacctctgactatgat
cgtgagaagctccaggagcgtctggcaaaattgatcggcggtgttgctgtcatcaatgtc
ggtgccgccaccgagattgaaatgaaagagaaaaaagcccgtgttgaggatgcgctcaat
gctactcgcgctgctgtggaagagggtgttgttcctggcggcggcgtggccttcctgcgt
tgcatcaaggctctggagtccctgaagctggtcggagagcaggatcttggtcgtcagatc
attatgcgtgccctggaagagccggttcgtcagattgcagccaacgccggtatggaaggc
tctgtggttgtcgagaaagtcaaggggatggaaggtgctaacggtttcaatgctgccctt
gaagagtatggtgacctcattgcggccggtgttattgacccgaccaaggtttctcgtaca
gccctgcagaacgcagcttctgtatccggtatgctgttgaccaccgagtgcatgatcgct
gatgagcctgataaggatgacgctggtgcaggcgctgctatgggcggtatgcctggtggc
atgggcggcatgggtggaatgggtggaatgggcggaatgatgtaa
DBGET
integrated database retrieval system
