Candidatus Electrothrix scaldis: SD837_02825
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Entry
SD837_02825 CDS
T11025
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
esd Candidatus Electrothrix scaldis
Pathway
esd00300
Lysine biosynthesis
esd00470
D-Amino acid metabolism
esd01100
Metabolic pathways
esd01110
Biosynthesis of secondary metabolites
esd01120
Microbial metabolism in diverse environments
esd01230
Biosynthesis of amino acids
Module
esd_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
esd00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
SD837_02825 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SD837_02825 (dapF)
Enzymes [BR:
esd01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
SD837_02825 (dapF)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Pro_racemase
Motif
Other DBs
NCBI-ProteinID:
WPD23497
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Position
630303..631157
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AA seq
284 aa
AA seq
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MQTPDFPVPFVKMSGTGNDFIIIDHRKPVLAPEAMADFAAKVCRRKFSAGADGLILIEDS
SEADFQWQFFNADGSVAEMCGNGARCAARFAFLQGIAPAEMRFATLAGIIEASVSEKDVA
VKMTDPVDLKMDQRITVDGKEYTVHSIDTGVPHAVVFVDDIEQTDVRTLGSFIRHHQAFM
PAGTNVNFAQRQGDAIKVRTYERGVEDETLACGTGAAASAIIAALLGQAASPVNIITSGG
DRLTILFDIKEGMEKGAEGAVQNVFLKGPAYTIYSGTFDAEALL
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgcagacacctgactttcctgtcccctttgtgaagatgagcggcacaggcaatgatttc
atcattattgatcaccgtaaaccagtacttgcccctgaggcgatggcagactttgcggcc
aaggtttgccggagaaaattttccgctggtgcagatggtttgatccttattgaggattcc
tctgaggcagacttccaatggcagttcttcaacgcagacggctcagttgcggagatgtgc
ggtaacggtgcccgttgtgcggcccgctttgcctttttgcagggtattgccccggcagag
atgcgctttgccaccttggctggcattattgaggcctctgtctctgaaaaggatgttgcc
gtgaagatgaccgatcccgtggacctgaaaatggaccagcgcatcactgtggacgggaaa
gaatacacggttcacagcattgataccggtgtcccccatgccgtggtctttgtcgatgat
atcgagcagactgatgtccgcaccttagggagtttcatccgccatcatcaggcctttatg
cctgctggtaccaatgtgaactttgcccagaggcaaggagatgccatcaaggtccggact
tatgagcggggcgtggaagatgagaccctggcctgcggaacaggggcagcagcctcagcc
atcattgccgcactcctgggtcaggccgcctctccggtcaacatcattacctccggtggt
gatcgtctgactatcctgttcgatatcaaagagggcatggagaaaggtgctgaaggagct
gtccagaatgtctttctcaagggaccggcgtataccatttattctggaacattcgacgct
gaggccttgctgtaa
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