Candidatus Electrothrix scaldis: SD837_03300
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Entry
SD837_03300 CDS
T11025
Symbol
kdsA
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
esd Candidatus Electrothrix scaldis
Pathway
esd00541
Biosynthesis of various nucleotide sugars
esd01100
Metabolic pathways
esd01250
Biosynthesis of nucleotide sugars
Module
esd_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
esd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
SD837_03300 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
esd01005
]
SD837_03300 (kdsA)
Enzymes [BR:
esd01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
SD837_03300 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
esd01005
]
Lipid A
SD837_03300 (kdsA)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
NeuB
Motif
Other DBs
NCBI-ProteinID:
WPD23589
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Position
736079..736936
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AA seq
285 aa
AA seq
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MKSFTIATVSGGKPVPVGPEHPLLLLAGPCALESGELGWRIATEMKAICERLGISYVFKA
SFDKANRTSLDSFRGPGLRNGLRQLDRIRQEVGVPVVSDVHETSQMDLAVDALDIIQIPA
FLCRQTDLLVAAAKTGKTVNLKKGQFVSPWDMQHAVEKLRAAGCDRILLTERGASFGYNN
LVVDMRSLPVMRSFGCPVIFDATHSVQLPGGMGGSSGGQREFIPTLTRAAIAAGIDGLFM
EVHPDPDNALCDGPNSIPLNEVEALLEQLLAIRETVQKVTDNLAN
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcctttacaatagcgacagtctcggggggaaaacccgtacctgtcgggcctgag
catcctcttttattgctggctggcccttgtgctttggagtctggtgaattgggatggcgg
attgccacggaaatgaaggcgatatgtgagagattaggcatttcatacgtcttcaaggca
tcctttgataaggcaaatcgtacctccctggattcctttcgtggaccagggttgcgaaac
gggttgcgccaactggatcgtatccgccaggaagtgggcgtgccggtggtctcggatgtc
catgaaacaagccagatggatcttgcagtagatgcgcttgatattattcagattccggcc
tttctctgtcgtcaaaccgaccttcttgttgctgcggcaaaaaccggaaaaactgtgaac
ctgaaaaaagggcagtttgtctctccctgggatatgcaacatgctgtggaaaaattgcgg
gctgcgggctgtgaccggattcttctgacagagcggggggcgagcttcggctataataac
ctggtggtggatatgcgctcgctgcctgtgatgcgttcctttggctgcccggttatcttt
gatgccacccattcggtgcaattacctggtggtatgggcggaagctccggtggacaacgg
gagttcattcctaccttgaccagggcagctatagctgcggggattgatggactctttatg
gaggtacatcctgatccggataatgccctctgtgacggtcccaacagcattcctctcaat
gaggtagaggccttactggagcaactgttggctatacgggaaactgtgcagaaagtgact
gataacttagcaaattga
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