Candidatus Electrothrix scaldis: SD837_04135
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Entry
SD837_04135 CDS
T11025
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
esd Candidatus Electrothrix scaldis
Pathway
esd03030
DNA replication
esd03430
Mismatch repair
esd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
esd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SD837_04135 (dnaX)
03430 Mismatch repair
SD837_04135 (dnaX)
03440 Homologous recombination
SD837_04135 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
esd03032
]
SD837_04135 (dnaX)
03400 DNA repair and recombination proteins [BR:
esd03400
]
SD837_04135 (dnaX)
Enzymes [BR:
esd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SD837_04135 (dnaX)
DNA replication proteins [BR:
esd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SD837_04135 (dnaX)
DNA repair and recombination proteins [BR:
esd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SD837_04135 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
DNAX_ATPase_lid
AAA_5
AAA_22
RuvB_N
AAA_30
AAA_14
PIF1
AAA_19
TIP49
AAA_2
AAA_16
ResIII
TsaE
DEAD
AAA_18
Torsin
Mg_chelatase
SLFN-g3_helicase
AAA_24
nSTAND3
Zeta_toxin
AAA_28
ABC_tran
Rad17
VapE-like_dom
Motif
Other DBs
NCBI-ProteinID:
WPD23749
LinkDB
All DBs
Position
920032..921909
Genome browser
AA seq
625 aa
AA seq
DB search
MSYLVLARKSRPQTFAQVVGQKAVVRTLQNGLVQNRVPHALIFSGVRGTGKTTLARIMAK
ALNCEKGEPPEPCNECRSCKEIMAGSSVDLHEVDGASNRGIQEIRELKENIRFMPTSSKF
KIIIIDEVHMLTTEAFNALLKTLEEPPEHVYFMFATTELHKVPVTILSRCQRYELKRVSH
AELSAHFASLAEQEGISIDESALNMVVREAGGSVRDGLSLLDQVFSYCGDNVTGEEVADV
LGLVSHEVIADLARALLAKDIATALDCLEKVYSYGMDIKRFINEVLAWFRNLVVCSVSKD
PAQLLDLPVDELTLLQEVAAAYSAQTLFMMFNMLLEGLEKAAFSPRPRFAVEMTFIRAVQ
VDDVVPVTDLLTRLDDVLAGVALPQQQVARQTMLSQPPSQTPQQVSQPGQGRGAIMSPPP
SSSQAVPLAEVEKKKEPEPVIPPPQEPPPVEEQRPPEPDPPEKLVGATGRSPLPQDTGAP
VSSGAHTKDVRKLWPGFVQYVQERVQWMAAALKSSSSVRLENGVLTVNYDDSADCMLLGN
KENLVQLTEYAMDYFQEELEVTFKVPNSSACATDSNGAAAVRQERKKLANDALVLAAVDI
FSGQVGDIRVGARFRGTLNEEKNDE
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
gtgtcctacctcgtcctcgccagaaaatcccgaccccagacctttgctcaggtggtcggc
cagaaagccgttgtccgtaccctgcaaaacggattagtacagaaccgggtgccccatgcc
ctgatcttcagcggggtgcgcggtaccggtaaaactactcttgcccgcatcatggccaag
gccctgaactgcgaaaagggagaaccgcctgaaccctgcaacgaatgccgctcctgcaag
gagatcatggcagggagttccgttgatctgcacgaggtagatggtgcctccaaccggggt
attcaggagatccgggagctgaaggaaaatatccgcttcatgcccaccagctccaagttc
aagatcatcatcattgatgaggtccacatgctcaccaccgaggcctttaacgccttgctc
aagacccttgaggagccgcctgagcatgtctatttcatgtttgccaccacggaattgcac
aaggtgccggtgaccatcctttcccgctgtcagcgctacgagctcaagcgtgtttctcat
gcggagctgtctgcccattttgcctctttagcggagcaggagggaatcagcattgatgag
tcagccctgaacatggtggtccgtgaggcaggaggttcggtgcgcgatggccttagtctg
ctggatcaggtcttttcttattgcggcgacaacgtcactggcgaggaggtggctgatgtg
ctgggcctggtcagtcacgaggtgattgccgatcttgcccgcgccctgctcgcaaaagat
attgccactgccctggactgtttggagaaggtctatagctacggcatggatatcaaacgc
ttcattaatgaagtgctggcctggtttcgcaatctggtggtgtgcagcgtcagcaaagac
cctgctcagcttcttgatctccctgtcgatgaactgaccctgttgcaggaggtggcagca
gcctattctgcgcaaacgctgttcatgatgttcaatatgctgcttgaagggctggaaaag
gctgccttttctcctcgtccccgctttgctgtggagatgacctttatccgggccgtgcag
gtggatgatgtggtgccggtgacggacctgcttacccgccttgatgatgtgctggctggt
gtggccttgccgcaacagcaggtcgctcggcaaacaatgctatcacagcctccatcgcag
acgcctcagcaggtttcgcagccagggcagggcaggggagcgataatgtctccaccgcct
tcgtcttcacaagctgtacctcttgccgaggtcgaaaaaaaaaaagaacctgaaccggta
atccctcctccgcaagagcctccccctgtggaggagcagcgaccgccggaaccagatcca
cccgaaaaattagtaggggcgactggccggtcgcccctacctcaagatacaggtgccccg
gtttcatcaggtgcgcatacaaaagatgtgcgcaagctgtggcccggttttgtccagtat
gtgcaggagcgggttcaatggatggcggcggccctgaaaagttcttcctctgttcgtttg
gaaaacggtgtcctgaccgtgaattatgatgattctgcggactgtatgctgctggggaat
aaggagaaccttgtgcagctgactgagtacgcaatggattattttcaggaggagctggag
gtgacctttaaggtgcccaattcttccgcctgtgccacagattcaaacggtgcggcagct
gttcgacaagagcggaaaaaattggccaatgatgcattagtcctggcagccgtggatatt
tttagtggtcaggtcggggatattcgggttggtgctcgtttccgtggaactttgaatgag
gaaaaaaatgacgaataa
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