Candidatus Electrothrix scaldis: SD837_04305
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Entry
SD837_04305 CDS
T11025
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
esd Candidatus Electrothrix scaldis
Pathway
esd03030
DNA replication
esd03430
Mismatch repair
esd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
esd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SD837_04305
03430 Mismatch repair
SD837_04305
03440 Homologous recombination
SD837_04305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
esd03032
]
SD837_04305
03400 DNA repair and recombination proteins [BR:
esd03400
]
SD837_04305
Enzymes [BR:
esd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SD837_04305
DNA replication proteins [BR:
esd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SD837_04305
DNA repair and recombination proteins [BR:
esd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SD837_04305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
WPD23783
LinkDB
All DBs
Position
complement(956580..957263)
Genome browser
AA seq
227 aa
AA seq
DB search
MLSLDPPHPVLQKNRVQFLDFHQGAPLAEYSFVVCDTELTGLNKRKDEIISIGAVRIVNL
QIQLDQTFHRFIRPVNINPNKATLIHRITPEELKKADPAEEVLPQFIEFCDNSLIVGHFV
GLDMYFLNKTARQVLGGTLSNPGVDTMRLARRYKDSGQTDHYGHHDHASAYNLDALAKEF
GLPAFKPHDALEDALQTAYLFLYLIKKFKDGGINSLKELYRAGRILH
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgctttctctggatcctccgcatcctgtcttgcaaaaaaacagggtgcagttccttgac
tttcatcagggggcgcctctggcagaatacagctttgtcgtctgcgacaccgagttaacc
ggtctgaataaacgcaaagacgagatcatctccataggtgctgttcgtatcgtcaatctc
cagattcaacttgatcagaccttccatcgctttatccgtcctgttaatatcaatccgaat
aaagctactctcattcacagaattacaccagaggaactcaaaaaagcagatcctgctgaa
gaggtgctccctcaattcatagagttctgcgacaacagtctgatcgttggtcatttcgtg
ggattggacatgtatttcctcaacaagacagcccgtcaggtcttgggtggaaccctgtct
aatccaggagttgacaccatgcggcttgcccgcagatataaagacagtggacagactgat
cactacggacatcacgaccacgcctcagcctacaatttggatgcgctcgccaaagaattt
ggcctgcctgcctttaagccccatgatgcattagaagatgccctccaaacagcctatctc
tttttatatcttataaaaaaattcaaagacggcggcattaattctctaaaggaactttat
agggccggaagaattctgcactga
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