Candidatus Electrothrix scaldis: SD837_04375
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Entry
SD837_04375 CDS
T11025
Name
(GenBank) HU family DNA-binding protein
KO
K05788
integration host factor subunit beta
Organism
esd Candidatus Electrothrix scaldis
Brite
KEGG Orthology (KO) [BR:
esd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
esd03032
]
SD837_04375
03036 Chromosome and associated proteins [BR:
esd03036
]
SD837_04375
03400 DNA repair and recombination proteins [BR:
esd03400
]
SD837_04375
DNA replication proteins [BR:
esd03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
SD837_04375
Chromosome and associated proteins [BR:
esd03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
SD837_04375
DNA repair and recombination proteins [BR:
esd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
SD837_04375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
YtxC
Motif
Other DBs
NCBI-ProteinID:
WPD23797
LinkDB
All DBs
Position
complement(977431..977733)
Genome browser
AA seq
100 aa
AA seq
DB search
MNKSELIEALAEKIELPVRETAAITKTIIDAMSNALVEGDSIEIRGFGSFTVKQYGAYTG
RNPKSGEKINVAPKKLPFFKVGKDLRERVDSEARSQDEEK
NT seq
303 nt
NT seq
+upstream
nt +downstream
nt
atgaataaatcggaacttatagaggcattagccgagaaaatcgagctgcccgtacgcgaa
actgctgctatcaccaagaccatcattgatgcaatgagcaatgccttggttgagggcgat
tctattgaaatccgtggattcggaagttttacagtcaagcagtacggtgcctatacaggc
cgcaacccgaaatcaggagaaaaaattaacgttgctccgaaaaagctccccttcttcaag
gtgggcaaagatctgagagaacgggtggattctgaagcaagaagccaggacgaagaaaaa
taa
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