KEGG   Candidatus Electrothrix scaldis: SD837_04375
Entry
SD837_04375       CDS       T11025                                 
Name
(GenBank) HU family DNA-binding protein
  KO
K05788  integration host factor subunit beta
Organism
esd  Candidatus Electrothrix scaldis
Brite
KEGG Orthology (KO) [BR:esd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:esd03032]
    SD837_04375
   03036 Chromosome and associated proteins [BR:esd03036]
    SD837_04375
   03400 DNA repair and recombination proteins [BR:esd03400]
    SD837_04375
DNA replication proteins [BR:esd03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    SD837_04375
Chromosome and associated proteins [BR:esd03036]
 Prokaryotic type
  Nucleoid associated proteins
   IHF (integration host factor)
    SD837_04375
DNA repair and recombination proteins [BR:esd03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Facilitator
      SD837_04375
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_euk_1 YtxC
Other DBs
NCBI-ProteinID: WPD23797
LinkDB
Position
complement(977431..977733)
AA seq 100 aa
MNKSELIEALAEKIELPVRETAAITKTIIDAMSNALVEGDSIEIRGFGSFTVKQYGAYTG
RNPKSGEKINVAPKKLPFFKVGKDLRERVDSEARSQDEEK
NT seq 303 nt   +upstreamnt  +downstreamnt
atgaataaatcggaacttatagaggcattagccgagaaaatcgagctgcccgtacgcgaa
actgctgctatcaccaagaccatcattgatgcaatgagcaatgccttggttgagggcgat
tctattgaaatccgtggattcggaagttttacagtcaagcagtacggtgcctatacaggc
cgcaacccgaaatcaggagaaaaaattaacgttgctccgaaaaagctccccttcttcaag
gtgggcaaagatctgagagaacgggtggattctgaagcaagaagccaggacgaagaaaaa
taa

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