Candidatus Electrothrix scaldis: SD837_07980
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Entry
SD837_07980 CDS
T11025
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
esd Candidatus Electrothrix scaldis
Brite
KEGG Orthology (KO) [BR:
esd00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
SD837_07980 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
esd03019
]
SD837_07980 (rnc)
03009 Ribosome biogenesis [BR:
esd03009
]
SD837_07980 (rnc)
03036 Chromosome and associated proteins [BR:
esd03036
]
SD837_07980 (rnc)
Enzymes [BR:
esd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
SD837_07980 (rnc)
Messenger RNA biogenesis [BR:
esd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SD837_07980 (rnc)
Ribosome biogenesis [BR:
esd03009
]
Eukaryotic type
90S particles
RNase
SD837_07980 (rnc)
Prokaryotic type
rRNA processing factors
SD837_07980 (rnc)
Chromosome and associated proteins [BR:
esd03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
SD837_07980 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DSRM_2
TEBP_OB2-like
Motif
Other DBs
NCBI-ProteinID:
WPD24491
LinkDB
All DBs
Position
1807440..1808174
Genome browser
AA seq
244 aa
AA seq
DB search
MGTSIEILLLDQTEQLAELQKKLGYTFIKKELLLLSMIHSSFAFERLDTRQHNETLEFLG
DAVLDLTIGHMLFTRFPKKREGQLTRIRSALVNEAGLAKVARCLDLGKYLLLGRGEDGSG
GREKSSILSCAYEALVGAMFMDSGYDTVLRYVQQTFAPLIEQQGERLIHADSKSRLQEYL
QELHNEGPSYVLDEEEGPAHARIFSVSARFRDQVLGAGKAGSKKEAEQQAARAALALLQE
PAKK
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgggaacctctattgaaatattgctcctggatcagacagagcaacttgcggaactccag
aagaaactcggctacacctttataaaaaaggagttgctcctgttatctatgattcacagt
tcctttgcctttgaacggctggacaccaggcagcataatgaaacactggaattcttgggt
gatgcagtgcttgacctgactataggccatatgctctttacccgttttcccaaaaaacgt
gaaggccagctaacccgaatacggtctgctctggttaatgaagctggcttggcaaaggtt
gcccgttgtcttgatctcgggaaatatcttcttcttgggcgaggagaagatggttccgga
gggcgggaaaaatcatcgattctttcctgtgcatacgaggccttggtcggggcaatgttt
atggatagcggctatgacacggtattgcggtatgtgcagcagacctttgcgcctctgatt
gagcagcagggagaacgtctcattcatgctgattcgaaaagtcgcttgcaagagtatctt
caggagttgcataatgaaggaccatcgtatgttcttgacgaggaagaggggcctgctcat
gccaggattttttctgtgtcagcccgatttcgggaccaggtgcttggtgctggcaaggct
ggcagcaaaaaagaggctgagcaacaggcagcccgtgccgccttggcattgcttcaggaa
cctgcaaaaaaataa
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integrated database retrieval system