Candidatus Electrothrix scaldis: SD837_09910
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Entry
SD837_09910 CDS
T11025
Name
(GenBank) AAA family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
esd Candidatus Electrothrix scaldis
Brite
KEGG Orthology (KO) [BR:
esd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
esd03400
]
SD837_09910
DNA repair and recombination proteins [BR:
esd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SD837_09910
Archaeal homologous recombinant proteins
SD837_09910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
ABC_tran
nSTAND3
AAA_21
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WPD24863
LinkDB
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Position
complement(2265252..2268959)
Genome browser
AA seq
1235 aa
AA seq
DB search
MRILRLRLQNLNSLTGKWELDFTHPAFISDGIFAITGPTGAGKTTILDAICLALYGRTPR
LDRVTKGGNEIMSRQCGECSAEVEFATVKGTFRCSWYQHRGRKQADGALQPPKRELSEAK
EDGKILTTKVNEVAQLVEEYTGMDFDRFTRSMLLAQGGFAAFLQASQDERAPILEQITGS
AIYSEISKRVHARFTAERNAQEKLEEKTASMPLLTATQAAEIQQNLNKEQEEETRLNKAL
EDKEAALNWLNRMNSLRKELEQITKEQESLVQEEQAFAEDAVRLKAAQQALVLDGDYGQL
VSTRKQQAEESIALDTLQQRLPAQEKSLAQAEERLATSKEFLEQSKKSREQGHAQIKQVR
ELDLHIREKEQVIRKAQATGHDLQQQNAAEQKQSHNLEKSLGLAQARQAQSRSYLDSHQV
DEQLVSDLAGIRKSLERFKEVADKQADLGPTLSKAEQQVLQATQKWQAAAQACNAAEKEL
TTLSQQRQVIQEETGPRLEGHAREELHREQNALAEQRNILGKLLDILQKKESIKQELVKL
RLRQEELAETKKQQDEQINLLRLQRDQAQQEVDVRRTVVEQAKRIRDLEEERAHLRENTA
CPLCGSLDHPYAQGNIPPLNEYEQNLQTALAAEKQTERALSKAEIQAARLVQEEQNLGER
SKEKQDVVLEAEEIIAGLCREFAQLGQESKTGLHDDLRGEKTSALTARLTRLKERLTSIQ
QQLEALDQLERKLARLSKALETQQAKVNQAMQEQERSVHAKEQVEQERQRLNQEQQATAK
ELEEIRALALTELAVYGITELRLPALPQLLTDLTRRKEGWQHQQKAFSTAGEEITTLQSK
LRELQAGISARAAQLTHIEQEITEANQQGQALAQKRFHLFGEKNPDAEERKLATALRQAE
ERMEQERKEHTHLLRECELTRTGIKERKESISIRNEVLAQLENTFFQRLQENGYADEATW
QAARLPEDKQHDLQNRAEALLKDKTRLEERLQDRQTRLQEEEQLRLTEASPEELSKEYTE
LATARKQATERIGSLNQQLLADKEQRARQQDLLTSLEAQKKECLRWKELHDLIGSADGKK
YRNFAQGLTFELMVSRANEQLARMSDRYLLVRDQAQPLELNVIDSWQAGEIRSTKNLSGG
ESFVVSLALALGLSEMVGGNVRVDSLFLDEGFGALDEEALETALETLAGLRRDGKLIGVI
SHVGALKERIACQLEVVPGTGGQSVVQGAGVRRVE
NT seq
3708 nt
NT seq
+upstream
nt +downstream
nt
atgcgcattctccgccttcgtctccagaacctcaattccctgaccggcaaatgggagctg
gatttcactcaccctgcctttatcagcgacggaatattcgctatcaccggccccaccggt
gctggcaaaaccaccatccttgatgccatctgcctggctctgtacgggcgcaccccccgc
ctggatcgggtgactaagggcggcaatgaaatcatgtcccggcaatgcggcgaatgctct
gccgaggtggaattcgccactgtcaaaggtacctttcgctgctcctggtaccaacacagg
ggccgcaagcaggcggacggagcccttcagcccccgaaacgggagctttccgaggcaaaa
gaggacggaaagattctgaccaccaaggtcaacgaggtggcccagcttgtggaagaatac
acaggcatggattttgaccgcttcacccgttccatgctcctggcccagggtggttttgcc
gcctttctccaggccagtcaggatgaacgtgccccgattctggagcagatcaccggcagt
gcaatctacagcgaaatctccaaacgggtccatgcccgctttaccgcagaacggaatgcc
caggaaaagctggaagaaaagaccgcctccatgccgctcctcactgctactcaagcggct
gaaatacagcagaacctgaacaaggagcaggaagaagagacccgcctcaataaagcactg
gaggacaaggaggcagccctgaactggctcaacaggatgaatagcctgcgtaaagaactg
gaacagatcacaaaggagcaggaaagtctggtccaggaagaacaggcctttgccgaggat
gcggtccgactcaaggcagcccagcaggccttggttctggacggagattatggccaactt
gtttccacccgtaagcaacaggcagaggagagcatagcgcttgacaccttacaacagcgc
ttgccagcccaggaaaaatcccttgcccaggcagaggagcgtttggcgaccagcaaagag
ttcctggagcaaagcaagaaaagcagggagcaaggccatgcccagataaagcaggtgcgc
gagctggacctccatatccgggagaaggagcaggtcatccgtaaggcacaggccactggc
catgatctccagcaacaaaacgcagctgagcaaaaacaaagccacaacctggaaaaatcg
cttggccttgcccaggcccgccaggcgcagagccgctcctacctggacagccatcaggtg
gatgagcagctggtcagtgatctggctggcatccgcaagagccttgagcggttcaaagaa
gttgcggacaaacaggctgaccttggtcctaccctgagcaaggcggaacagcaggttctc
caggccactcaaaaatggcaggctgcggcacaggcctgtaacgcagcggaaaaagaactc
accactctttcccagcaaaggcaggttatccaggaagagacgggaccccgcctggaagga
catgcaagggaagagttgcaccgggaacagaatgcccttgctgagcaacgtaacatcttg
gggaaactcctggacattctccagaaaaaagaaagcatcaagcaggaactggtcaaactt
cgtcttcgccaggaagagctggctgagacaaaaaaacagcaggatgagcagatcaacctc
ttacgcctgcaacgggatcaggcccagcaggaagtggacgtccgacgcactgtggtcgag
caggccaagcgcatccgcgatctggaggaggagcgagcccatctgcgggagaatacagcc
tgccctctctgcggttctcttgatcacccctatgcccagggcaatatcccgccgctcaac
gaatatgaacaaaacctgcaaacagccctggcagctgaaaaacagacagaacgagctctc
agcaaagcggagatccaggcagcccgccttgtccaggaggaacaaaaccttggcgaacgc
agcaaagaaaagcaggatgttgtgctggaggctgaggaaatcatcgcagggctctgtcgt
gagtttgcccaactggggcaggaatctaaaactggtctgcatgatgaccttcgtggcgaa
aaaacctctgcattgactgctcgccttactcgactgaaagaacgcctgaccagtattcag
cagcagctggaggccctggatcagctggagagaaaactggcccgactcagcaaggctctg
gaaacccaacaggccaaggtcaatcaggccatgcaggaacaagagcgaagtgttcatgcc
aaggagcaggtagagcaggagcgccagcgcctgaatcaggagcaacaggcaacagcaaaa
gaactggaggagatccgcgccctggccctgacagagctggcagtatacggaataacagag
cttcgcctccctgccctgccccagcttctcaccgacctgactcgccgcaaggaaggctgg
cagcaccagcaaaaggccttcagcacagcaggtgaggagataacgaccctccagagtaag
cttcgagagctacaagcaggcataagcgcccgggcagcgcagctgacacatattgagcag
gaaataaccgaggccaatcaacaagggcaggccctggcccagaaacgcttccatctcttt
ggcgaaaagaaccctgatgcggaagagcgcaagctggcaacggcgctcaggcaggcagag
gagaggatggagcaggagcgaaaagaacatacccatttactcagagaatgcgagctgacc
aggaccggcatcaaggaaagaaaagagtctatcagcataagaaatgaggtgctggcccag
ctggagaatactttctttcaacgacttcaggaaaatggttatgctgacgaggcgacctgg
caggcagcccgtcttcctgaagacaagcaacacgatctacagaacagagcagaggccttg
ctgaaagacaaaactcgccttgaggaacggctgcaggacaggcagacccgccttcaggaa
gaggagcaactccggctcactgaggcctctcctgaagagctgagcaaagagtatacggag
ctggccactgcccgcaagcaggcaacagagcgaatcggctccctgaatcaacaattgctg
gccgataaggagcagcgcgcccggcagcaggacctactgacaagcctggaggcccagaaa
aaggaatgcctgcgctggaaagaattgcacgatctgatcggctcggctgacggcaagaaa
taccgtaactttgcccagggcctgacctttgagctcatggtctcccgcgccaacgagcaa
ctggcccggatgagtgaccgctacctgctggtccgggatcaggcccagcccctggagctc
aacgtgattgattcctggcaggccggagagatccgctccaccaagaacctgtccggcggg
gaaagctttgtggtcagtctggccctggccctggggctgtccgagatggtgggcggcaat
gtgcgggtagactccctctttcttgatgagggctttggtgccctggatgaggaagccctg
gagacggcactggaaaccctggccgggttacgccgggatggcaagctgatcggggtgatc
tcccatgttggggcacttaaggagcggatcgcctgtcagctggaggtggttccagggact
ggagggcagagtgttgtgcagggggctggggtgaggagggtggagtga
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