Candidatus Electrothrix scaldis: SD837_11600
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Entry
SD837_11600 CDS
T11025
Name
(GenBank) class I SAM-dependent RNA methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
esd Candidatus Electrothrix scaldis
Brite
KEGG Orthology (KO) [BR:
esd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
esd03009
]
SD837_11600
Enzymes [BR:
esd01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
SD837_11600
Ribosome biogenesis [BR:
esd03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
SD837_11600
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
TRAM
Cons_hypoth95
MTS
Methyltransf_15
TRM5-TYW2_MTfase
Methyltransf_11
TehB
PabTrmU54_TRAM_dom
Methyltransf_23
Methyltransf_ANTKMT
PrmA
DUF6402
Motif
Other DBs
NCBI-ProteinID:
WPD20842
LinkDB
All DBs
Position
complement(2672860..2674149)
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AA seq
429 aa
AA seq
DB search
MKHTITIEKIIPGGRGLARTDAGQVIMIPFTLPGEQVLIREKKKKSGYLEGDLEQILSPS
PARIIPPCPLYGECGGCDLQHGSYEEQLLIKKGIVTESLQRAKVPFAADQIQNTLASPAQ
WGYRYRLRLKISPAGQLGFFRKKSNSFIPVDNCPVTTEDMCSALAELNSSGMLRSLAGIS
SEFELLQSPADGKITLVLRGDKQKRPSKAIYQKLEQLPSLAQVGWISRQGFQYLSSTAKP
LAQDILLKNGKCTLSWSGGCFSQVNPGQNQQLIQLVCAAAGEIQGKAVLDLYCGMGNFSI
PLALSGATVTGIEGNQESIHWAEENAHQAGISARFFTADVRAALEQLAGQGEKADLTLID
PPRSGVGEKIILLSHLEPEKILYVSCDPATLARDLNALCQHGYTIRTVTPVDMFPQTSHI
ETVVLLEKA
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgaagcacactatcaccattgaaaaaataatacctggcggacgaggactagctcggaca
gacgctggacaggttatcatgattcctttcaccttgcccggcgaacaggtgcttatcaga
gaaaagaaaaaaaaatccggctaccttgagggagatctggaacagatactttctccatct
ccggcgcggattatcccaccttgccctttgtacggggaatgcggcggctgcgaccttcag
cacggcagctacgaagaacaacttcttattaaaaaagggatagtaaccgagtcattgcag
cgagccaaggtaccttttgctgcggaccagatacaaaatacccttgcctctcctgcccag
tggggttatcgataccgcctgcggctgaagataagccctgcagggcagctgggattcttc
agaaaaaaaagcaatagctttatccctgtggataattgcccagtgaccacagaggatatg
tgctccgctctggccgagctgaatagctctggaatgctccggtccttggcgggaatttcc
tcggaatttgagctgctgcaatcccctgctgatgggaaaataacgctggtcctgagaggc
gacaagcaaaaacgcccttcaaaggcaatctaccaaaagcttgaacagcttccttccctt
gcccaggtaggctggatctcccgacaaggattccaatacctctcctcgactgccaagccc
ttagcgcaagatattctgctcaaaaacggaaaatgcaccctgtcctggtctggcggctgt
ttttcccaggttaatccgggccagaaccagcaactcattcaactggtctgcgccgcagct
ggagagatccaaggaaaagctgtgcttgatctctactgcggtatgggaaatttttccatc
cctcttgcgctcagtggcgcaacagtcaccggcattgaaggaaatcaggaaagtatccat
tgggcagaagaaaacgcccaccaagccgggatatcggctcgttttttcactgctgatgtt
cgtgccgctctggagcagctagcaggccaaggagaaaaagcagacctcaccctcatcgat
ccccctcgaagcggagtcggtgaaaaaatcattttgctttcacacctggagccggaaaaa
atcctctacgtttcctgcgatcccgcaaccctggcccgcgacctgaacgcactctgccag
cacggctatacaatacgcactgtcaccccggtggatatgttcccccagaccagccatatt
gaaacagtggttctactggaaaaagcctga
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