Candidatus Electrothrix scaldis: SD837_11985
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Entry
SD837_11985 CDS
T11025
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
esd Candidatus Electrothrix scaldis
Brite
KEGG Orthology (KO) [BR:
esd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
esd03016
]
SD837_11985 (truB)
Enzymes [BR:
esd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SD837_11985 (truB)
Transfer RNA biogenesis [BR:
esd03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SD837_11985 (truB)
Prokaryotic type
SD837_11985 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
WPD20917
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All DBs
Position
2758208..2758984
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AA seq
258 aa
AA seq
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MQQPAALPKGQEAITGVLLVDKPVGQSSFAVVKKVRWLLGIKKVGHAGTLDPFASGLLII
CVGRPATREIDGFMGGRKTYQAVLQLGKETETQDPEGKVISETEVPPLTVEEIAAVCKEF
LGPQKQAPPPYSAAKHKGKPLYHYARQGITIQKDPKPIEIFSLQVEAYDPVSEQVTIEVT
CSKGTYIRVLAADIGKKLGCGAYLTALRRTQSGCFAVDEALSGEELFSKEKDIRADALVS
RMLTVEQALEKHSVMEAA
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaacctgctgccctaccgaaagggcaagaagcgataaccggggtgttgcttgtt
gacaagccggttggtcagagctcttttgcagtggttaagaaagttcgttggttattgggg
ataaaaaaggtcgggcatgcagggaccttagatccttttgccagtggcttgttgattatc
tgtgtcggcagaccggcaacccgagaaattgatggttttatgggcgggcggaagacctat
caggctgttttacagttggggaaggaaaccgaaactcaggatcctgaaggaaaggttata
tccgagacagaggttccccctttgacggtggaggaaattgcagctgtctgtaaagagttt
cttgggccgcaaaagcaggctccaccaccgtattcagcagcaaagcataagggtaaaccg
ttgtatcattatgcccgtcagggcattacgattcagaaagatcccaaacccattgaaatt
ttttcccttcaggttgaggcctacgaccctgtcagcgagcaggtaacgatagaggtgacc
tgtagcaaggggacctatatcagagtgctggctgctgatataggaaaaaaactcggatgt
ggagcctatctcacggccctgcgtcgcactcaaagcggttgctttgctgttgatgaggcc
ctgagtggcgaagaactcttcagcaaagaaaaagatattagggccgatgctttagtgagc
aggatgctcactgttgaacaggccctggaaaagcactccgtcatggaggctgcttga
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