Candidatus Electrothrix scaldis: SD837_12665
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Entry
SD837_12665 CDS
T11025
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
esd Candidatus Electrothrix scaldis
Pathway
esd00061
Fatty acid biosynthesis
esd01100
Metabolic pathways
esd01212
Fatty acid metabolism
esd02024
Quorum sensing
esd04146
Peroxisome
Module
esd_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
esd00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
SD837_12665
00071 Fatty acid degradation
SD837_12665
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
SD837_12665
09145 Cellular community - prokaryotes
02024 Quorum sensing
SD837_12665
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
esd01004
]
SD837_12665
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
esd04147
]
SD837_12665
Enzymes [BR:
esd01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
SD837_12665
Lipid biosynthesis proteins [BR:
esd01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
SD837_12665
Exosome [BR:
esd04147
]
Exosomal proteins
Exosomal proteins of breast milk
SD837_12665
Exosomal proteins of breast cancer cells
SD837_12665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
DUF5955
Motif
Other DBs
NCBI-ProteinID:
WPD21053
LinkDB
All DBs
Position
complement(2921044..2922828)
Genome browser
AA seq
594 aa
AA seq
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MKPSETSKESSADIYFPVKEYREEGRAPHLNALIDSSCAEYKDLPALGTALQGTISYQEL
HERLLLIAAMLRQVGVNTGDRIALLAENSPNWGTAYFAILRLGAVCVPILPDLPEEDVLH
ILTEMACETVFTTRNLLKKITVKELDIHRIITLDDHQDQAFPVAITSFSDFLFQASNTYN
HALQAGNLQFPEPLPDQPASFMYTSGTSGFSKAVILSHKNFCANAYATNEAIHLPPGAVF
LSLLPISHAYEFTTGFLMPLIKGATVLYISKVPTPSVLEKICKKERPHALLAVPLVMEKI
YKKRVIPVVEGNKALALLCKLPLGRKFLFRRIGAKLHRFFGGRLEILGLGGAALNPEVEQ
FLRDARFPFLVGYGLSEAAPLLSGGPFEDRSILPGSAGKPVLGVEVRIADPNPQTGVGEI
LARGPNIMQGYWSNPQASQESLTEDGWLHTGDLGCMDAQGNLCIRGRSKSVIVLSNGENV
YPEAIEHRLISYPMVLDALVLENGPNLEAWVHLDYDNLTEQPHHTSHKRSREAGSRQEQI
AIELEQIRKSVNSRLGSASKLSAVFEQKQPFVKTATHKIKRYLYTAESLRREAE
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaccctctgaaacctccaaagaaagcagtgcagatatttattttccggtaaaggaa
taccgggaagaaggccgggctccccacctgaacgccctgattgattccagctgcgccgag
tataaggacctgccagccttgggaactgccctgcaagggacgataagctaccaggaattg
catgagcgcctcctccttattgctgccatgctccgtcaggtcggcgtcaacaccggggac
cggatcgctctgctggcggaaaactcgcccaactggggcacggcctatttcgccattctt
cgcctgggggctgtctgcgtgcccatcctgccggatctgcctgaggaagatgtgctccat
atcctcaccgaaatggcctgcgaaaccgtttttaccacgcgcaacctgctcaagaaaatc
acggtcaaggagctggatatccatcggatcatcactcttgatgatcaccaggatcaggcc
ttcccggttgctataacaagcttttcagactttcttttccaggcaagcaacacctataat
catgctcttcaggctggaaacctgcaattccccgagcctctgccggatcaacccgcctct
ttcatgtatacctctgggacctcgggattttccaaggccgtgatcctcagccataaaaat
ttctgcgccaatgcctatgccaccaatgaggctatccacctgccgcctggtgcagttttt
ctctccctcctccccatttcccatgcctacgaattcaccaccggctttctcatgcctctg
attaagggagccactgtgctctatatcagcaaggtacctaccccctcagtcctggaaaaa
atttgcaaaaaagaacggccccatgccctgctggctgtcccgctggtcatggaaaaaatt
tataaaaaacgggttatccctgttgtggaagggaataaagcccttgcgctcctctgcaag
ctgcccctggggagaaaatttctttttcgacggattggggcaaaactccatcgttttttt
ggcggacgtctggaaatactcgggctaggtggagctgccctgaatcctgaggtggaacaa
tttcttcgcgatgctcggttcccattccttgtgggttatggcctcagcgaggctgcccct
ctgctttctggcggcccttttgaagaccgtagtatcttgcccggctctgcgggcaagcct
gtgctgggggtggaagtgcgcattgccgatccaaatcctcagaccggtgtgggcgagatt
ctggcccgtggtcccaatatcatgcagggatactggtccaatccccaggcaagccaggaa
agcctcactgaggatggctggctacacaccggagatctgggctgcatggatgcacaggga
aatctttgtatacgcggacggtcaaaatcggttattgtgctttctaatggcgaaaatgtc
tatccagaggctattgagcatcgccttatcagctatccaatggtgcttgatgccctggtg
cttgaaaatggtccaaacctggaggcctgggttcatctggattatgataaccttactgag
cagccccatcatacctcgcataaaaggtctcgcgaggcaggctccaggcaggagcagatt
gccattgagcttgaacaaattcgcaaaagcgtgaatagccgactcggctccgcttccaag
ctgagcgcggtctttgaacaaaagcagccctttgtcaaaacagcgacccataaaatcaag
cgctatctgtatacagccgagagcttgcgacgagaggcagagtaa
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