Candidatus Electrothrix scaldis: SD837_15795
Help
Entry
SD837_15795 CDS
T11025
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
esd Candidatus Electrothrix scaldis
Pathway
esd00220
Arginine biosynthesis
esd00240
Pyrimidine metabolism
esd00250
Alanine, aspartate and glutamate metabolism
esd01100
Metabolic pathways
esd01110
Biosynthesis of secondary metabolites
esd01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
esd00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
SD837_15795 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
SD837_15795 (carB)
00220 Arginine biosynthesis
SD837_15795 (carB)
Enzymes [BR:
esd01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
SD837_15795 (carB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
ATP-grasp
ATP-grasp_3
ATPgrasp_Ter
Dala_Dala_lig_C
RimK
ATP-grasp_5
ATP-grasp_4
GARS_A
ATP-grasp_2
B12-binding
Death
MucBP_2
Methyltransf_3
Motif
Other DBs
NCBI-ProteinID:
WPD21657
LinkDB
All DBs
Position
complement(3654740..3657961)
Genome browser
AA seq
1073 aa
AA seq
DB search
MPKRTDIHKILIIGSGPIIISQACEFDYSGAQAVKALKEEGYEVVLINSNPATIMTDPGL
ADRTYIEPITPEYLIKVIERERPDAILPTLGGQTALNTAIKVAETGILEKYNVEMLAANI
DVIRKAEGREEFRDAMEKIGLNVPKSFIVHEIEEAMAAGDEIGFPVIVRPSFTLGGTGGG
VAYNRQELRELCTAGLDLSMTNEIMLERSLLGWKEYELEVVRDRKDNVVIICSIENIDAM
GVHTGDSITVAPQQTLSDREYQELRDASIAIIREIGVETGGSNVQFAVNPEDGEIMVIEM
NPRVSRSSALASKATGFPIAKIAAKLAVGYTLDELQNDITKETYAAFEPTIDYCVVKIPR
WTFEKFPEADDYLTTAMKSVGETMAIGRTFKEAFQKGMRSLEIGRMGFGFDGKAGMEDLH
QDDLEQGLTEPNSKRFFHLFEAMRRGMSIERMQELSKIDPWYLRSMQQIVDMGKEIQQRG
FSGLDADFLRVAKQHGFSDAQLGYLTGTSEDDIRKLRKENNVLPVYKLVDTCAAEFESYT
PYYYSCYDQENESLPSDRKKIVILGGGPNRIGQGIEFDYCCVHASFALEEIGVESIMVNS
NPETVSTDYDTSDRLYFEPLTREDVLNIIELEKPDGVIVQFGGQTPLNLAVALDKTGVPV
IGTSPDAIDRAEDRKRFQQLLQKLGLKQPENGTVNNLEDALKEVERIGYPVVMRPSYVLG
GRDMQIVYNDQGLREFMARPTIMGSEHPVLLDRFLKDAIEVDVDAISDGKMTVIGGIMEH
IEEAGIHSGDSACVLPPHTLSENMINEIMRATKAMAGELGVIGLMNVQYAVKDEQLYILE
VNPRASRTVPFVSKATGVPLAKMATKVMMGISLEELGFTEEVSIDHWAVKEAVFPFDRFE
NVDTLLGPEMKSTGEVMGIDDDLGLALAKSQQAANQKVPTSGCVFISVRRGDKAPLVPVV
KSLIARGFTLLATDGTAERFTEYGVACEQINKISQGRPHILDKIKDGQVQWIINTSSGSR
TTEDSYRIRRAALDYHIPYTTTVNGAVSMAQAIIATAEQEVGVKTVQEFSSAD
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaacgcacagatatacataagattttgattatcggctccgggccgatcattatc
agtcaggcctgtgaattcgattattccggtgcgcaggccgtcaaggccctcaaggaagag
ggctatgaggtagtgctgatcaactccaatccggccactattatgaccgatccggggctg
gctgatcgcacctatatagaacctattactccagaatacctgatcaaggttattgagcgg
gagcgtcctgatgccatcctgccgactctgggtggtcagaccgcgctgaacaccgccatc
aaggtagcagaaaccggcattctggaaaagtataatgtcgagatgctggccgctaatatc
gacgtaatccgcaaggccgaaggccgggaagagttccgcgatgccatggagaagatcggt
cttaatgtgccgaaatcctttatcgtccatgagattgaggaagcaatggcagccggggac
gagataggctttcctgttattgttcgtcccagctttaccttgggcggaaccggcggcggt
gtggcctataaccgccaggaattacgtgagctctgcaccgctggtctggatctttccatg
accaatgagatcatgctggaacgcagtctgctgggttggaaggaatacgagctggaggtg
gtgcgcgaccgtaaggataacgtggtcattatctgctccatcgagaacattgatgcaatg
ggtgtgcataccggtgattccatcactgtggccccgcaacagaccctgtctgatcgcgag
tatcaggagctgcgtgatgcctccatcgccattattcgggaaatcggtgttgagaccggt
ggttccaatgtgcagtttgcggttaacccggaagacggcgaaatcatggtcattgagatg
aacccccgtgtttcccgttcttccgctctggcttccaaggccaccggcttccctattgcc
aagatcgcggccaagctggctgtgggctataccctggatgagttacagaacgacatcacc
aaggaaacctatgctgcctttgagcctaccattgattactgcgtagtcaaaattccccgc
tggacctttgagaaattcccggaagcagatgactatctcaccacagcgatgaaatctgtg
ggcgagactatggctattggccggacttttaaggaggcctttcagaaaggtatgcgttcg
ctggaaatcgggcggatgggctttggttttgatggtaaggctgggatggaagatctgcac
caggatgatctggagcaaggcctgaccgagcccaactccaagcgtttcttccatctcttt
gaagctatgcgtcgcggcatgtccattgagcggatgcaggaattgagcaagattgatccc
tggtacctgcgcagtatgcagcagattgttgacatggggaaggagattcagcagcgcggt
ttctccggccttgatgccgattttctccgggtagccaagcaacatggtttttccgatgcc
cagttggggtatctgactggcacctcagaggatgatatccgcaagctgcgcaaggaaaat
aacgttcttccggtgtataagctcgtggacacctgtgcagccgagtttgagtcctatact
ccgtattattactcctgctatgatcaggagaatgagtccctgccttcggatcggaaaaag
atcgtaatcctgggtggtggacccaaccggatcggtcaggggattgagtttgattattgc
tgcgtgcatgcctcctttgccctggaggagatcggggtggaatccatcatggtcaactcc
aacccagagaccgtgtccacagactacgacacctcggatcgtctctattttgaaccgctg
acccgtgaggatgtgcttaatattattgagctggaaaaaccggacggggttattgtccag
ttcggtggtcagactccgctgaacctggctgtggccttggataagacaggcgtgccggtc
atcggtacttcaccggacgccattgaccgggctgaggaccggaagcgcttccagcagctc
ctccagaagctggggctcaagcagccagagaacggcacagtgaataatctggaagatgcc
ttaaaagaggtagagcggataggctatccggtggtgatgcgtccttcctatgttctgggt
ggtcgggatatgcagattgtctataatgatcaggggctgcgggagttcatggcccggcct
accattatgggcagcgagcatccggtcctgctggacagatttctgaaagatgctattgag
gtggacgtggatgctatctccgacggcaagatgaccgtgattggtggaattatggagcat
attgaggaggccggtattcattccggtgactcagcctgtgtgttgccgccccataccctg
tcggaaaacatgatcaacgagatcatgcgggccaccaaggcaatggctggcgaactgggg
gttatcggtctgatgaacgtgcagtatgctgtcaaagacgagcagctctacatcctggag
gtgaatcctcgggcgtcccgtaccgtgccttttgtttccaaggccaccggcgtgcccctg
gccaagatggctaccaaggtgatgatgggtatcagcctggaggaactgggctttactgag
gaggtgtctattgatcactgggcggtgaaagaggcggtgttcccctttgatcgttttgag
aatgtggataccctgctcggaccggagatgaaatccactggtgaggtcatgggtattgac
gatgaccttggtctggccctggccaagtcacagcaggcagccaaccagaaggttcctacc
tccggctgtgtgttcatctctgtgcggcgtggtgataaagcgcctttggtgccagtggtt
aagtcactgattgcaagagggttcactctgctggccactgatggtactgctgagcgcttt
accgagtatggggtagcctgtgagcagatcaataagatctctcagggacggccgcatatt
ctggataagatcaaggatgggcaggtgcagtggattatcaacacctcttccggcagcagg
accaccgaggattcctatcgaatccgtcgggccgccctggattatcatatcccctacacc
accaccgtgaatggtgcggtttctatggcccaggccattattgccactgcggagcaggaa
gtgggtgtgaagactgtgcaggagttttcttcggcagattaa
DBGET
integrated database retrieval system
