Candidatus Electrothrix scaldis: SD837_16050
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Entry
SD837_16050 CDS
T11025
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
esd Candidatus Electrothrix scaldis
Brite
KEGG Orthology (KO) [BR:
esd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
esd03032
]
SD837_16050
03036 Chromosome and associated proteins [BR:
esd03036
]
SD837_16050
03400 DNA repair and recombination proteins [BR:
esd03400
]
SD837_16050
DNA replication proteins [BR:
esd03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
SD837_16050
Chromosome and associated proteins [BR:
esd03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
SD837_16050
DNA repair and recombination proteins [BR:
esd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
SD837_16050
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
VWA_3
PCuAC
SasG_E
HU-CCDC81_euk_2
Urease_beta
Motif
Other DBs
NCBI-ProteinID:
WPD21708
LinkDB
All DBs
Position
3717930..3718202
Genome browser
AA seq
90 aa
AA seq
DB search
MNKKELVEAMAGAADISKSAAEKALNSMLMSITEALSEGDKVTLVGFGTFSTANRAARQA
KNPQTGAVMEIPAKTVAKFKPGSKLSEAVK
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaaaagaattagttgaggctatggccggggcagctgacattagcaaatcagca
gcagaaaaagcactcaatagcatgctgatgagcattactgaggccctttccgaaggtgac
aaagtcacgctggtcggattcggtactttttctactgctaaccgtgctgcacgacaggca
aaaaatccccaaacaggggctgttatggaaattcccgctaagactgtcgcgaaattcaag
ccgggtagcaaactctccgaggctgtaaaataa
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