Candidatus Electrothrix scaldis: SD837_16310
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Entry
SD837_16310 CDS
T11025
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
esd Candidatus Electrothrix scaldis
Pathway
esd03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
esd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SD837_16310 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
esd03400
]
SD837_16310 (uvrB)
DNA repair and recombination proteins [BR:
esd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SD837_16310 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SD837_16310 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
Kinesin
AAA_16
HVO_A0114
SWI2_SNF2
nSTAND_NTPase5
Urocanase
Microtub_bd
DUF87
DUF7553
Motif
Other DBs
NCBI-ProteinID:
WPD21759
LinkDB
All DBs
Position
complement(3781993..3784020)
Genome browser
AA seq
675 aa
AA seq
DB search
MSTRFQLTSPFTPSGDQPAAINKIVQGLNDGAQHQVLLGVTGSGKTFTMAQVIAQVNRPA
LVMAPNKTLAAQLFAEFKELFPHNAVEYFVSYYDYYQPEAYIPASDTYIEKDSAINDAID
KMRHSATRALLTRDDVLIVASVSCIYGLGSPDEYKNMHLFLQRDEDYPMEEVQRRLVFML
YERNEMSFHRGTFRVRGDVIDIFPVYEEDKAVRVEFFGDTIDAISIIDPLRGVVLEDVDE
LTLFPSSHFVTGQENLQRAMHTIKDELRERLDELYAENRLVEAQRLEQRTQFDLEMITEL
GYCNGIENYSRHLTGKPPGAPPPNLLDYFPDNYITIIDESHIGVPQIGGMFNGDRARKTT
LVNFGFRLPSALDNRPLRFDEFEQRVHQTVYVSATPGPYEMEKCEGRIVEQLIRPTGLLD
PRIEVRPAGTQVDDLLEEIRLCTERGESVLVTTLTKRMAEDLTEYYENVGVKVRYLHSDI
KTLERIELIRDLRRGEYNVLVGINLLREGLDIPEVALVAILDADKEGFLRSERSLVQTCG
RAARNADGTVILYADKITKSMQYTIDETNRRRKIQEEFNQKHGIVPQTIISEIKDSMSAH
LRASGWVPEEGAADDAGVLQAAEPEMVYRSAADLHKDIAELEKQMQEAADNLAFEEAAAL
RDQIKDLKMLELEMR
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgtccacccgcttccaactcacctcccccttcactccctcaggcgatcagccagcagca
atcaataagattgtccaagggctgaatgacggagcacaacatcaggtgctgctcggcgtg
accggctcaggcaagacctttacaatggcccaggtcattgcccaggtcaatcggcccgcc
ttggtcatggccccgaacaagaccttggctgcccagctctttgccgagtttaaggagctt
tttccccataacgcggtggagtattttgtctcctactacgattattaccagcctgaagcc
tatatcccggcctcggatacctatatcgaaaaggactcggctatcaacgatgctatcgat
aagatgcgccactccgccacccgtgccctgctcacccgcgatgatgtgctgatcgtggcc
tcggtttcctgcatctacggccttggttcaccggacgagtacaagaacatgcatctcttt
ctccagcgggacgaggactatcccatggaggaggtccagcgacgcttggtcttcatgctc
tacgagcgcaacgagatgtcttttcatcggggcactttccgggtgcgcggcgatgtgatt
gacatcttcccggtctatgaagaggacaaggcggtgcgggtggagttcttcggcgatacc
attgacgcgatctccatcattgatcccctgcgcggggtggtattagaggatgtggatgag
ctgaccctgtttccctccagccattttgtcacgggccaggaaaacctgcaacgggccatg
catactattaaggatgagctgcgtgaacgtctggatgaactttatgcagaaaaccggttg
gtggaggcccaacgcctggagcaacgcacccagtttgatctggagatgattactgaactg
ggctattgcaacggcattgagaactacagtcgccatctcaccggtaaaccgcccggtgcg
ccgccgcccaacttactcgactatttcccggataattatatcaccatcattgatgagtcc
catatcggggtgccccagatcggcgggatgttcaacggggatcgggcgagaaagaccacc
ctggtcaacttcggctttcgcctgccttcggccttggacaaccgccctttgcgttttgat
gagtttgaacagcgggtgcatcaaactgtctatgtttcggccacgcctggaccatacgag
atggaaaaatgtgagggccgaatcgtggaacagctcattcgtccgacgggcctgcttgat
ccccggattgaggtgcggccagcagggactcaggtggatgatctgctggaggagatcagg
ctttgcacggaacggggcgagtccgttcttgtcaccactctgaccaagcgcatggctgag
gatctgactgagtattatgagaatgtcggcgttaaggtccgttatctccattctgatatt
aaaaccttggaacggatcgaattgatccgggatctgcgtcggggcgagtacaacgtgctg
gtgggcatcaacctcttgcgcgagggcctggatatcccggaggtggccttggtagcgatt
ctggatgcagacaaggagggctttctccgttccgagcgttccctggtccagacctgcggc
cgggcggcccgtaatgctgacggcacggtgattctctatgccgataagatcaccaagtcc
atgcagtacaccattgatgagaccaatcggcggcggaaaatccaggaggaatttaaccaa
aaacatggtattgtcccgcagacgattatctccgagattaaggactccatgagcgcgcat
ctccgggcctcgggctgggttcccgaagaaggggctgctgacgatgctggtgtacttcag
gccgcagagccggaaatggtgtatcgctctgctgctgatctgcataaggacatagcagag
ttggagaagcagatgcaggaggcggcggataatcttgcctttgaggaggcagctgccctg
cgtgatcagatcaaggatttgaagatgcttgagctggagatgagataa
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