Candidatus Electrothrix scaldis: SD837_20045
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Entry
SD837_20045 CDS
T11025
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
esd Candidatus Electrothrix scaldis
Pathway
esd00550
Peptidoglycan biosynthesis
esd01100
Metabolic pathways
esd01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
esd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SD837_20045 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SD837_20045 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
esd01011
]
SD837_20045 (mrdA)
Enzymes [BR:
esd01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
SD837_20045 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
esd01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
SD837_20045 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
WPD22468
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All DBs
Position
4558037..4560028
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AA seq
663 aa
AA seq
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MKNIRKQNRKREPAQDISGWPRDTGTPRITHINDGELDFYRRRAMYSSSVLVFFFIIIIT
RLWYLQIQQGDEYNKLAKNNRVRYLEIAAPRGNILDRKGREIVTNRPSFNVVWVRESNRV
DDALLKKISAILGIEISELLARTRKMVGTPGHIPIRLAEELSWDKVAYIENNRMELPGIQ
IEVAPQRVYHYGNLASHIIGYLGEISQKDLSSDAFEGYKSGDMVGKMGLEKIREKDLRGE
KGRHYMEVNALGFEQRNLKGLEPLPGNDVQLTIDVDLQQAAEELMMKDDKSGAVVAIEVN
TGRLLMLASSPVLELDKFLGGISIKHWKEMLNNPHHPLINKIVQGQYPPASTYKIVTAIA
ALAEGVITPDSSVYCPGHYRFGNRTYRCWKKSGHGAVNLKRALSESCDVYFYQVGQRLGV
NRLASYATRLGLGQKTGVEMEHERSGLIPTSDWKLQRYKRPWQEGETLSIAIGQGFNLVT
PLQLALMTATVANGGTLYKPGMIETVRDPDGHIIEQFQPTVLDRFDDQGRNLEVVKEGLI
EAVNGRRGTARRAKLENIIVAGKTGTAQVVRLKQYKHLKEEDIPYKYRDHAWFTCFAPAE
RPEIAVTVLVEHGLHGGSAAAPIAKAVLEKYFGPRGKMSENMASVVLFQEELASSTDSPE
IIH
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatatcagaaaacagaatcgaaaaagagagcctgctcaggacatcagcggctgg
ccccgtgataccggaacaccacgcatcacccatattaacgacggtgagcttgatttttat
cgtcgccgggccatgtattcctcttctgttctggtcttttttttcatcatcatcattacc
cgactctggtatctgcaaattcaacaaggggatgaatacaataaactcgcaaaaaataac
cgagtacgctatctggaaattgccgcgccccgaggaaatattctggatcggaaagggcgt
gaaattgttaccaaccgcccctccttcaacgttgtctgggtcagggaaagtaaccgtgtt
gacgatgccctgcttaaaaaaatctctgcaattctcgggatagagatatctgagctgcta
gcaagaacccgcaagatggttggcacaccgggccatatccccattcgccttgccgaagaa
ttgagttgggacaaggttgcctatattgaaaataacagaatggaacttcccggaatccag
atagaggttgctccgcaaagggtatatcattacggcaacctcgcctcacacatcatcggt
tatctcggtgaaatcagccaaaaagatctttcgtcagacgcatttgagggctataagtcc
ggtgatatggtcggaaaaatgggacttgaaaaaatacgggaaaaagaccttcgcggagaa
aaagggcgtcattacatggaagtgaatgctctcggatttgagcagcgtaatctcaaagga
ctggagcccctcccaggtaatgatgtgcaactcaccattgatgttgatcttcagcaggca
gctgaagaactcatgatgaaggatgacaaatccggtgcagtggttgcaatcgaggtcaac
actggtcgcctgctgatgttggccagctctcctgttttggagctggataaattcctcggt
ggcatttcaataaaacattggaaggagatgctgaataatcctcatcatcctctgatcaac
aagattgtccagggtcagtaccctccggcttccacttacaaaatagtcacagccatagca
gccctggcagagggcgttataacgcccgacagctcagtctattgtcccggtcattaccgc
ttcggcaatcgaacctatcgttgctggaaaaaatccggacacggcgctgtcaatctgaag
cgtgcattgtctgaatcctgtgatgtctatttttaccaggtcgggcaacggctcggggtt
aacaggctggccagctacgcaactcggttaggactgggccaaaaaaccggggtggaaatg
gagcatgaacggagcggacttatccccacttcagactggaagctgcaacgctataaacga
ccttggcaggaaggcgagaccctttccatagctatcgggcaaggatttaacttggtgact
ccccttcagctcgctctcatgactgcaactgtagctaatggcggcaccttgtacaaacca
ggtatgatcgaaactgtacgcgatccagatggtcatattattgagcaattccagcccacg
gtcctggatcgttttgatgatcagggccgcaatctggaagtcgttaaagaaggattaatt
gaagcagtcaatggacgtcgtggtacagcacgccgagccaaacttgaaaacatcatcgtt
gcagggaaaaccgggacagcacaggttgttcggctcaagcagtataaacatttaaaagaa
gaagatatcccctataaatatcgagaccatgcctggtttacctgctttgcaccagcagaa
cgcccggaaatagcggtcacagttctggttgagcatggcctgcacggcggatcagcagcg
gcccccattgctaaggcagtgttggaaaaatacttcggaccacggggaaaaatgtcggaa
aatatggcctcggtggtgctctttcaggaagagcttgcctcatcaacagattccccagaa
atcatacattaa
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