Candidatus Electrothrix scaldis: SD837_20790
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Entry
SD837_20790 CDS
T11025
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
esd Candidatus Electrothrix scaldis
Pathway
esd03440
Homologous recombination
Brite
Enzymes [BR:
esd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
SD837_20790 (recC)
DNA repair and recombination proteins [BR:
esd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SD837_20790 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WPD22610
LinkDB
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Position
complement(4725086..4728328)
Genome browser
AA seq
1080 aa
AA seq
DB search
MYLFQSNRLESLFDALCATLAEPVSNPLAPEIIVVQNPGMARWLSQQIALRTGICANFAF
PLPASFIWQVFEQTLGALPDLTLFDRKVLLWRIQGELDTLLNHPGMAEIRTYLAEDNDGR
KRFQLAEKISDLFDQYQVYRPAMLLHWEQGGEGHWQARLWRRLTAENRQHRAAVLQRFIQ
AAEVGELQRDALPERVSVFGINSLAPAYLEVIERISQLVDVRVFHLSPCQQAWDDILSER
LLALKRQSWREQGIDDLSAYFTAGNPLLASMGTVGQEFFSLLMCMDPQEIRLYEEPEGGT
LLEQIQGDILNLQDRGGQGEGMAQGKTPLPPDDSSIRFHCCHSHIREVQVLHDRLLDLFQ
QDPGLKPADILVMAPDITTYTPAVAGVFGSAPTRRFIPWSIADQSSRLEQPIVEGFLQLL
ELQESRFTAPDVMALLENQAILRHFGLAAEDVAVMRSAILEAGIRWGLDQEQRCEQGLAE
VQQHTWDFGLDRLLLGYLTGSLAEPWQGIMPCSYTVSALGSWLGGLIGFIRSLQELRRKM
KVTHLPEQWAELLLDMIDDFLAGDGGGRESQDGLLILRRSIADFVEHCRLAGFVQELSLP
IIRHWFEEQLAEPAGGQAFLAGRVTFCNMVPMRSVPFKVIWLLGMNDLDYPRAQRTPAFD
LMARQPRLGDRSRRDDDRYLFLEALLSARKLLAISWVGRDQQDNSSLPPSVVVAELRDYI
NRAWAACNEMGKEGKGKQTAADLLTVEYPLQPFSRHCFSGAQKTASYASEWLPQPLSSSD
RALAFVPAPLPPPEPCQQVDLGRLVRFWNHPVRFFLEQRMGLRTRYEEEVIPESEAFCLD
HLQKYLLSQEIMKQQRLEEKTPSHILPPLYRMQAAGHLPGGRFGHILYQEMERKTAMLVE
DLEALIQERAEPEEVQLVVEDILLTGQLSSLYRSGRVTFRPANLKAGDILQLWIHHLVLL
LQAPSSVQPLSVHAGLDTKISFQEVDRPEEELAVLLRFFQQGTMEPLHFYPKTSHAWAKA
KSEAAKWNAARRIWYSDYYRGEEDDPSYELALRAQNPLDQGFAELAELFYPVLSSLVKYE
NT seq
3243 nt
NT seq
+upstream
nt +downstream
nt
ttgtacctcttccaatccaaccggctggaaagcctcttcgatgccctctgcgcaaccctt
gccgagccggtcagcaatcccttggccccggagattatcgtggtccagaatccgggcatg
gcccgctggctttcccagcagatcgccctgcgcactgggatctgtgccaactttgccttt
ccccttccagccagttttatctggcaggtctttgagcagaccctgggggcgctgcctgac
ctaaccctctttgatcgcaaagtcttactctggcgtattcagggagagttggatacgctg
ttaaaccatcccggcatggcagagatcagaacctatctggccgaggataatgacggcaga
aagcgttttcagctggcggaaaagatcagtgatctctttgatcagtaccaggtctaccga
ccagctatgcttctgcactgggaacagggcggggaggggcattggcaggcccggctctgg
cggcgtctgactgcggagaatcggcagcatcgggccgcagtcctgcaacgattcatccag
gccgctgaagtgggtgagctccagcgcgatgccttaccggagcgggtctcggtctttggt
atcaactccctggccccggcctacctggaggtgattgagcggatcagccagctggttgat
gtccgtgtttttcatctcagtccctgccaacaggcctgggacgatatcctgtctgagcgc
ctgctggccctgaagcggcagagttggcgggaacaggggattgatgatctcagcgcctat
tttacagcgggcaatcctctcctggcctcgatgggtacggtgggccaggagttcttctcc
ctgctcatgtgcatggatccgcaggagatccggctttatgaggagccagaaggaggaaca
ttgctggagcagatccagggcgatattctcaatctccaggaccggggagggcagggggag
gggatggctcaaggtaaaaccccgctccccccggatgactcttcgatccgttttcattgc
tgtcatagccatatccgggaggtccaggtgctccatgatcgcctccttgatctctttcag
caggatccgggtctgaaaccagcggatatcctggtcatggccccggatatcacgacatac
actccggcagtggctggggtctttggctctgccccgactcgtcgttttatcccctggtcc
attgcggaccagtcctcacgcctggaacaacccattgtggaaggctttctccaactcctg
gaactacaggaaagtcgattcacggccccggatgtcatggccctgctggaaaatcaggcc
atcctccggcacttcgggcttgctgccgaggatgtggctgtcatgcgttcggctattctg
gaggccggtatccgttggggactggatcaggaacagcgctgcgagcagggacttgccgag
gtgcagcagcatacctgggattttggcctggatcgtctcctgctgggctatctgaccggc
tcgcttgctgagccttggcaagggatcatgccttgttcctacacagtcagtgctctgggc
tcctggctcggtggactgatcggttttattcgttccttgcaggagctgcggcgcaagatg
aaggtgacgcatctgccggagcaatgggctgagctcttgctggacatgatagatgatttt
cttgccggtgacggaggaggtcgggaaagtcaggacggtctgctcatcctgcgacggagc
attgccgactttgtggagcattgccgcttagctggctttgtccaggagctcagtctgccc
atcatccgccattggtttgaggagcagcttgctgaaccggcaggcggacaggcctttctt
gccgggcgggtgaccttttgcaatatggtgcccatgcggtctgtgcccttcaaggtgatc
tggttgttgggcatgaatgacctggattatccccgtgcccaacgcactccggcctttgac
ctgatggcccggcagccccgcctcggggaccggagccgccgcgatgatgatcgctatctc
tttcttgaggccctgctttcggcccgaaagctgctggctatctcctgggtgggccgtgac
cagcaggataactcctcactgccgccctccgtggtggtggcggagttgcgggattatatc
aatcgcgcctgggcagcttgtaatgaaatgggcaaggaagggaagggaaagcaaacagct
gctgacctgctgactgtggaatatcccttgcaacctttcagcaggcattgtttctcgggt
gctcagaaaacagccagttatgcctcggaatggcttccccaaccgctctcttcttcggac
cgtgcccttgcctttgttccggctcccttgcctccgccggaaccctgtcaacaggtggat
cttggtcgcctggttcgtttctggaatcatccggtgcgtttttttctggaacagcggatg
ggcctgcgcactcgttatgaagaggaggttatcccggaaagcgaggccttttgcctggat
catttgcagaaatacctgcttagtcaggagatcatgaagcagcagcgccttgaggaaaaa
acgccttcgcatatccttcctcctctgtatcggatgcaggccgcaggccatctgcccggc
ggtcgcttcggtcatatcctttatcaggaaatggaacggaagacggccatgctggttgag
gatttggaagccctgatccaggagcgggcagagccggaggaggtgcagctagtggttgag
gatatccttctcaccggtcagctttcttccctgtatcgcagcggcagggtcacctttcgt
ccggccaatctgaaggcaggagatattctccaattatggattcatcatctggtgcttctc
cttcaggcgccgtcaagcgtgcagccgctctccgtgcatgcaggcctggatacgaagatc
tcctttcaggaggtggatcggccagaagaagagcttgcggtcttgctccgtttttttcag
caggggactatggaaccattgcatttttatcccaaaaccagtcatgcctgggccaaggcg
aaatcagaggcagccaagtggaatgccgcccgcagaatctggtattcagattattatcgc
ggcgaagaagacgacccttcctacgagcttgccttgcgtgcgcaaaatcctctggaccaa
ggttttgccgaactggcagaactcttttatccagtcctctcttcgctggtgaaatatgaa
taa
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