Candidatus Electrothrix scaldis: SD837_20920
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Entry
SD837_20920 CDS
T11025
Name
(GenBank) Ni/Fe hydrogenase subunit alpha
KO
K14126
F420-non-reducing hydrogenase large subunit [EC:1.12.99.-
1.8.98.5
]
Organism
esd Candidatus Electrothrix scaldis
Pathway
esd00680
Methane metabolism
esd01100
Metabolic pathways
esd01120
Microbial metabolism in diverse environments
esd01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
esd00001
]
09100 Metabolism
09102 Energy metabolism
00680 Methane metabolism
SD837_20920
Enzymes [BR:
esd01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.98 With other, known, physiological acceptors
1.8.98.5 H2:CoB-CoM heterodisulfide,ferredoxin reductase
SD837_20920
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Gene cluster
GFIT
Motif
Pfam:
NiFeSe_Hases
Complex1_49kDa
DUF346
Motif
Other DBs
NCBI-ProteinID:
WPD22635
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Position
4755573..4757039
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AA seq
488 aa
AA seq
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MERITIDPITRLEGHGKIDIFLDDKGDVANSYFQIPELRGFERFCVGRPIEEMPLLTNRI
CGVCPEAHHMAAVKAADAAYKVTPPRTAKLLRELLYMAFYCTDHTTHFYALGGPDFIIGP
DAPVAERNILGVIHKVGMEIGGKVIQMRKFGHKVVEMIGGRKVHPAVAIPGGVTKILSEG
ERKEIEEMGRWAIDFAQFSLQAFNDIVLANQTYLDLIVGDIYRDETYYMGLVDENNKVNF
YDGKVRVVDPEGKEFCKYAPNEYMNHLSEHVEPWTYLKFPYLKNVGWKGFTDGKDSGVYM
ATPLSRLNAADGMATPLAQEHYEKMYETLGGKPVHQRLAIHWARLIELLYAAERWVELVT
DPDITSSDVHCKPTEIPTEGVGIVEAPRGTLTHHYWTDERGILTQVNLIVGTTNNYAPIQ
MSTKKAAQHLIKGGKVNEGLLNMVEMAFRAYDPCFGCATHSLPGQMPLEVRLHDQRGELM
DVIKQYVD
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggaacgcataactattgatcccattactcgccttgagggacacgggaagattgatatc
tttctggatgataagggcgacgttgccaattcctattttcagatccctgagctgcgcggc
tttgaacgcttctgcgtgggccgccccattgaggaaatgcccctgctgaccaaccgtatc
tgcggagtctgcccggaggcccatcatatggcggcggtcaaggccgcagacgctgcttac
aaggtcacaccgccgcgcacagccaagctgctgcgcgagctcctctacatggccttttac
tgcaccgaccataccacccatttctacgccctgggcggcccggactttatcataggcccg
gatgccccggttgctgagcgtaacatcctcggtgttatccataaggtgggtatggagatc
ggtggcaaggtcatccagatgcggaaattcggtcataaggtggtggagatgatcgggggc
cgcaaggtccacccggctgttgccatccccggtggtgtgaccaagattctcagcgaggga
gagcggaaagagattgaagagatgggccgctgggccattgattttgcccagttcagtctt
caggcatttaacgacatcgttctggcgaaccagacctatctggacctgattgtcggggat
atctaccgcgatgagacctattatatggggctggtggatgaaaacaacaaggtcaatttc
tacgatggtaaggtgcgggtggttgatcctgaaggcaaggagttctgtaaatacgcgccc
aatgagtacatgaaccatctttctgagcatgtggagccctggacttacctcaagttccct
tacctgaaaaacgtgggctggaagggatttactgatggcaaggattccggcgtgtacatg
gcaaccccgctctcccgcctcaatgcggcagacggcatggccaccccgctggctcaggaa
cattatgaaaagatgtacgagactctgggcggcaagccagtccatcagcggttggcgatc
cattgggcccgcctgattgagctgctctatgcagcggaacgctgggtggagctggtaacc
gatccggatatcacctcttcagatgttcattgcaaacccacggagatccccactgagggc
gtcggtattgtcgaggccccacgcggcaccctgacccatcattactggaccgatgagcgg
ggaatcctcactcaggtcaacctgattgtgggtaccaccaataactatgccccgattcag
atgagcaccaaaaaggcggcgcagcatctgattaagggcggtaaggtgaatgaaggcttg
ctcaatatggtggaaatggccttccgggcctacgatccctgttttggttgtgcgacccat
tcgttgccgggacagatgccgctggaggtgcgtttgcatgaccagcgtggtgagctgatg
gatgtgattaagcagtatgtggattaa
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