Candidatus Electrothrix scaldis: SD837_22020
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Entry
SD837_22020 CDS
T11025
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
esd Candidatus Electrothrix scaldis
Pathway
esd03420
Nucleotide excision repair
esd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
esd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SD837_22020
03430 Mismatch repair
SD837_22020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
esd03400
]
SD837_22020
Enzymes [BR:
esd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SD837_22020
DNA repair and recombination proteins [BR:
esd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SD837_22020
MMR (mismatch excision repair)
Other MMR factors
SD837_22020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_12
ResIII
DEAD
ATP_bind_1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WPD22847
LinkDB
All DBs
Position
complement(4983824..4985854)
Genome browser
AA seq
676 aa
AA seq
DB search
MNMNEQHTTYPDSYFMPYDRFSHFDALAPTLDLSSLNQAQHAAVTHGEGPVLVIAGAGSG
KTMTLVHRTAWLLSRGVSPESVLLLTFTRRAAREMLDRAANLSGCSCTGVMGGTFHSVAN
ILLRRHGYFLGFPSDFTIIDRGDSEGIINHIRTSLNLAGAGKRFPAKRVLFNILSAAVNK
SYPVQDIIMREHTHLVEYTHDILAVHREYQAFKENNRLMDYDDLLVNLRRLLSESDIAQE
RICSQFRYILVDEYQDTNLIQAEIVGLLALEHNNIMAVGDDAQSIYSFRGADFENIMQFP
DQYPGAQTIKLEQNYRSVRPILALTNAVIAQAETRYTKELFSDIPGKELPLLYKVSSEKD
EARLVASTIHELITAGTPQENIAVLFRSGFHSYNLEIELLAKNIDFDKRGGMKFTESAHV
KDVLAFFRLLLNAYDNLSLTRILLMLEKVGPKTVGNILSTVLDHKDPIAALKEYKSRSKW
IGNLHALADMLLKLRAPGLTVVARFDLVMTWYEAAFERIYHDDYPKRRHDLEYVRTLAAE
YYDIQSFIDDTALDPPEVTEATTNQDPKKKKLVLSTIHSAKGLEWDVVFLIGLADGLFPR
QNADDEELEEERRLLYVAATRAKQQLFLMYPELIRTPDRKYHQASLSPFLQQVSPRLYEK
VTYRKSHRKVEESAPF
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgaatatgaacgaacaacacaccacctacccggactcatacttcatgccgtatgatcgt
ttttcccattttgatgcacttgcaccgacccttgacctcagctccctgaaccaggcccag
catgcagctgttacccacggagaggggccggtgctggttatcgccggagcaggtagcgga
aaaaccatgacccttgtgcatcgtaccgcatggctgttgagtcggggcgtttcccctgaa
tccgttttgcttctcaccttcacccgccgcgctgcccgcgagatgctggaccgggccgcg
aacctctccggctgctcctgcaccggggttatgggtggtacctttcactcagtggcaaac
atcctcctgagaagacacggctatttcctcggcttcccttctgattttaccattatcgac
cggggcgattcagaagggatcatcaaccatatcaggacctcattgaatcttgccggagcc
gggaaacgctttccggcaaaacgagttctgttcaacatcctttccgctgcggtcaataaa
tcctatccggttcaggatatcatcatgagagaacatacccaccttgtggagtatacccat
gacatccttgctgttcatcgtgaatatcaagccttcaaagaaaacaaccggctcatggat
tatgacgatctgctggttaaccttcgccgcctcctctcggaatctgatattgcccaggag
cgcatttgctcccagttccgctacatcctggttgatgaataccaggataccaacttgatt
caggcggaaatcgtgggcctgttagctcttgaacacaataatatcatggccgtgggtgat
gatgcccagtctatctacagtttccggggtgctgattttgaaaatatcatgcagttccca
gaccaataccccggagcccagaccatcaagcttgaacagaactaccgctcagttcgtcct
atcctggctctgaccaatgcggttatagcccaggctgaaacccgttatacaaaagagctg
ttcagtgatattcccggaaaagagctccccctattatataaggtctcatcggaaaaagac
gaggcccgcctcgtggcctctacgatccatgagctgattaccgcaggcaccccacaggaa
aacatcgcagtgctgttccgctctggcttccattcctacaacctggagatcgagcttctt
gcaaaaaacatcgattttgataaacgcggcggaatgaagttcaccgagtcggcccacgtc
aaagacgtgctggcctttttccgtctcctcctcaatgcctacgataacctctccctgacc
cgcattcttctgatgttggaaaaagttggacctaaaaccgtgggcaatatcctctcaacc
gtgcttgaccacaaagacccgattgcagctctcaaggagtacaaaagtcgatccaaatgg
ataggtaatctgcacgccctggctgatatgctcctcaagctccgcgcccccggcctcact
gtggtggcccgcttcgacctggtcatgacctggtacgaggcagcattcgaacgcatctac
cacgatgattaccccaaacgccgccatgatctggaatatgtccgcactctggctgctgaa
tactacgatattcagtcattcatagatgacacggccctcgatccgccagaggtaaccgaa
gcaacaactaaccaggacccgaaaaagaaaaaacttgtcctgtccaccatccattccgcc
aaaggcctggaatgggatgttgtcttccttatcggtcttgctgatggactctttccccgt
cagaacgcagatgacgaagaactggaagaagaacgccgcctgctctacgtggctgctaca
cgtgcaaaacaacagctcttcctcatgtaccccgaactgatccgcaccccggaccggaag
taccatcaggcctccctgtctcctttccttcaacaggttagcccccggctctacgagaaa
gtgacctacaggaaatcacaccggaaggtggaagaatcagctccgttttag
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