Escherichia coli O150 H5 SE15 (commensal): ECSF_1324
Help
Entry
ECSF_1324 CDS
T02077
Name
(GenBank) ATP-dependent RNA helicase
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
ese
Escherichia coli O150:H5 SE15 (commensal)
Brite
KEGG Orthology (KO) [BR:
ese00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ese03009
]
ECSF_1324
Enzymes [BR:
ese01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
ECSF_1324
Ribosome biogenesis [BR:
ese03009
]
Prokaryotic type
rRNA helicases
ECSF_1324
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
BAI54864
LinkDB
All DBs
Position
1415887..1417260
Genome browser
AA seq
457 aa
AA seq
DB search
MTAFSTLNVLPPAQLTNLNGLGYLTMTPVQAAALPAILAGKDVRVQAKTGSGKTAAFGLG
LLQQIDASLFQTQALVLCPTRELADQVAGELRRLARFLPNTKILTLCGGQPFGMQRDSLQ
HAPHIIVATPGRLLDHLQKGTVSLDALNTLVMDEADRMLDMGFSDAIDDVIRFAPASRQT
LLFSATWPEAIAAISGRVQRDPLAIEIDSTDALPPIEQQFYETSSKGKIPLLQRLLSLHQ
PSSCVVFCNTKKECQSVCDALNEVGQSALSLHGDLEQRDRDQTLVRFANGSARVLVATDV
AARGLDIKSLELVVNFELAWDPEVHVHRIGRTARAGNSGLAISFCAPEEAQRANIISDML
QIKLNWQTPPANSSIVPLEAEMATLCIDGGKKAKMRPGDVLGALTGDIGLDGADIGKIAV
HPAHVYVAVRQAVAHKAWKQLQGGKIKGKTCRVRLLK
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgctttttctaccctgaatgttttgcctcccgcccaactcacaaaccttaatggg
ttgggttatttaaccatgacgccggtgcaggccgccgcgcttccggcgatccttgccgga
aaagatgttcgcgtgcaggcgaaaaccggcagcggcaaaacggcggcttttggcctcggc
ttgttacagcaaattgatgcgtcgctatttcaaacccaggctttagtgctgtgtcctacg
cgtgaactggcggatcaggtggcaggtgaattgcgtcggctggcgcgttttctgccaaat
accaaaattttgacgttgtgcggtggtcaaccgttcggtatgcagcgtgattcgttacaa
catgcgccgcatattatcgtggcaacgccgggccgtttgctggatcacctgcaaaaaggc
actgtatcactggatgcgttgaatacgctggtgatggatgaggccgaccgcatgctggat
atgggatttagtgacgccattgatgatgtcatccgttttgcgccagcatctcggcagaca
cttctgttttcggcaacctggccggaagccattgccgcaatcagcggaagagtgcagcgc
gatcctttagcgattgaaattgactcaacagatgctctgccacctattgaacaacaattt
tatgagacatccagcaaaggcaaaattcctctgttgcaacggttattaagcttgcatcag
ccatcctcttgcgtggtgttttgcaataccaaaaaagaatgccagtctgtctgcgacgcg
ctgaatgaagtagggcaaagtgcattgtcgttacacggcgatctggagcaacgcgatcgc
gatcagaccctggtacgttttgctaacggtagcgcccgtgtactggtcgcgactgatgtt
gctgcgcgtggtctggatataaaatcgcttgagctggtggtgaactttgagctggcgtgg
gaccctgaagttcatgtacatcgcatcggtcgtacagctcgtgcaggaaatagcggtctg
gcgatcagtttctgtgctccggaagaagcacagcgggccaatatcatttctgacatgttg
cagataaaacttaactggcaaacgccgccagcgaatagttccattgtgccgctggaagca
gaaatggcaacgttgtgtatcgatggcgggaaaaaagccaaaatgcgcccgggtgatgta
ttaggtgcgctgacaggagacatcgggcttgatggcgcagatattggcaaaattgccgtg
catccggcgcatgtttatgtcgcggtgcgtcaggctgttgctcataaagcatggaaacag
ttacagggcgggaagattaaaggaaaaacgtgccgggtgcggttattaaaataa
DBGET
integrated database retrieval system
