KEGG   Escherichia coli O150 H5 SE15 (commensal): ECSF_1774
Entry
ECSF_1774         CDS       T02077                                 
Name
(GenBank) RNA polymerase sigma factor for flagellar operon
  KO
K02405  RNA polymerase sigma factor FliA
Organism
ese  Escherichia coli O150:H5 SE15 (commensal)
Pathway
ese02020  Two-component system
ese02026  Biofilm formation - Escherichia coli
ese02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:ese00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    ECSF_1774
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02026 Biofilm formation - Escherichia coli
    ECSF_1774
  09142 Cell motility
   02040 Flagellar assembly
    ECSF_1774
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ese03021]
    ECSF_1774
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:ese02035]
    ECSF_1774
Transcription machinery [BR:ese03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     ECSF_1774
Bacterial motility proteins [BR:ese02035]
 Flagellar system
  Flagellar assembly proteins
   Stator
    ECSF_1774
SSDB
Motif
Pfam: Sigma70_r3 Sigma70_r4 Sigma70_r2 Sigma70_r4_2 UPF0147 UPF0122 TFIIE_alpha SapB_1
Other DBs
NCBI-ProteinID: BAI55314
LinkDB
Position
complement(1887836..1888555)
AA seq 239 aa
MNSLYTAEGVMDKHSLWQRYVPLVRHEALRLQVRLPASVELDDLLQAGGIGLLNAVERYD
ALQGTAFTTYAVQRIRGAMLDELRSRDWVPRSVRRNAREVAQAIGQLEQELGRNATETEV
AERLGIDIADYRQMLLDTNNSQLFSYDEWREEHGDSIELVTDDHQRENPLQQLLDNNLRQ
RVMEAIETLPEREKLVLTLYYQEELNLKEIGAVLEVGESRVSQLHSQAIKRLRTKLGKL
NT seq 720 nt   +upstreamnt  +downstreamnt
gtgaattcactctataccgctgaaggtgtaatggataaacactcgctgtggcagcgttat
gtcccgctggtgcgtcacgaagcattgcgcctgcaggttcgactgcccgcgagcgtggaa
cttgacgatctgctacaggcgggcggcattgggttacttaatgccgtcgaacgctatgac
gccctacaaggaacggcatttacaacttacgcagtgcagcgtatccgtggcgctatgctg
gatgaacttcgcagccgtgactgggtgccgcgcagcgtgcgacgcaacgcgcgtgaagtg
gcacaggcaatagggcaactggagcaggaacttggccgcaacgccacggaaactgaggtt
gcggaacgtttagggatcgatattgccgattatcgccaaatgttgctcgacaccaataac
agccagctcttctcctacgatgagtggcgtgaagagcacggcgatagcatcgaactggtt
actgatgatcatcagcgagaaaacccgctacaacaactgctggacaataatctgcgccag
cgggtgatggaagccatcgaaacgttgccggagcgcgaaaaactggtattaaccctctat
tatcaggaagagctgaatctcaaagagattggtgcggtgctggaggtcggggaatcgcgg
gtcagtcagttacacagccaggctattaaacggttacgcactaaactgggtaagttataa

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