Escherichia coli O150 H5 SE15 (commensal): ECSF_2009
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Entry
ECSF_2009 CDS
T02077
Name
(GenBank) putative transcriptional regulator
KO
K21089
MerR family transcriptional regulator, activator of the csg genes
Organism
ese
Escherichia coli O150:H5 SE15 (commensal)
Pathway
ese02026
Biofilm formation - Escherichia coli
Brite
KEGG Orthology (KO) [BR:
ese00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02026 Biofilm formation - Escherichia coli
ECSF_2009
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ese03000
]
ECSF_2009
Transcription factors [BR:
ese03000
]
Prokaryotic type
Helix-turn-helix
MerR family
ECSF_2009
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MlrA_C
MlrA_helical
MerR_1
MerR
HTH_17
HTH_Tnp_1
Motif
Other DBs
NCBI-ProteinID:
BAI55549
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All DBs
Position
2166619..2167350
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AA seq
243 aa
AA seq
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MALYTIGEVALLCDINPVTLRAWQRRYGLLKPQRTDGGHRLFNDADIDRIREIKRWIDNG
VQVSKVKMLLSNENVDVQNGWRDQQETLLTYLQSGNLHSLRTWIKERGQDYPAQTLTTHL
FIPLRRRLQCQQPTLQTLLAILDGVLINYISICLASARKKQGKDALVVGWNIQDTTRLWL
EGWIASQQGWRIDVLAHSLNQLRPELFEGRTLLVWCGDNRTSAQQQQLTSWQEQGHDIFP
LGI
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atggcgctttacacaattggtgaagtggcgttgctttgtgatattaaccctgtcacgtta
cgcgcgtggcagaggcgttacggattgctgaaaccgcaacggacagacggcggccatcgg
ctgttcaacgatgccgatattgaccggatccgcgagatcaaacgctggatcgacaacggc
gtgcaggtcagcaaagtaaaaatgctgctcagtaatgaaaatgttgatgtgcagaacggc
tggcgcgatcagcaagaaacattactgacttacctgcaaagcggcaatctgcatagcctg
cgaacgtggatcaaagagcgcggtcaggattaccccgcccagacactcaccacacatctg
tttattcctctgcgccgacggcttcagtgccaacaaccgactctccagacgctgctggcg
atcctcgacggcgtactgatcaactacatctctatttgcctggcttcggcgcgcaaaaaa
cagggtaaagatgcactggtggttggctggaatattcaggataccactcgtctgtggctg
gagggctggattgccagtcaacaaggatggcgcattgatgtcctcgcccactcgctcaat
caactacgccctgaactgttcgaaggccgtacattgctggtgtggtgcggtgataatcga
acctccgcccaacagcagcaactcaccagttggcaagaacaaggccatgatattttccca
ctcggcatttaa
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