Escherichia coli O150 H5 SE15 (commensal): ECSF_3485
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Entry
ECSF_3485 CDS
T02077
Name
(GenBank) RNA polymerase omega subunit
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
ese
Escherichia coli O150:H5 SE15 (commensal)
Pathway
ese03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ese00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ECSF_3485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ese03021
]
ECSF_3485
03400 DNA repair and recombination proteins [BR:
ese03400
]
ECSF_3485
Enzymes [BR:
ese01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ECSF_3485
Transcription machinery [BR:
ese03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ECSF_3485
DNA repair and recombination proteins [BR:
ese03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ECSF_3485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Motif
Other DBs
NCBI-ProteinID:
BAI57025
LinkDB
All DBs
Position
3775530..3775805
Genome browser
AA seq
91 aa
AA seq
DB search
MARVTVQDAVEKIGNRFDLVLVAARRARQMQVGGKDPLVPEENDKTTVIALREIEEGLIN
NQILDVRERQEQQEQEAAELQAVTAIAEGRR
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcgtaactgttcaggacgctgtagagaaaattggtaaccgttttgacctggta
ctggtcgccgcgcgtcgcgctcgtcagatgcaggtaggcggaaaggatccgctggtaccg
gaagaaaacgataaaaccactgtaatcgcgctgcgcgaaatcgaagaaggtctgatcaac
aaccagatcctcgacgttcgcgaacgccaggagcagcaagagcaggaagccgctgaatta
caagccgttaccgctattgctgaaggtcgtcgttaa
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